RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29379782 29379782 PRJNA316313_P_NODE_417089_length_151_cov_5.184211_g415703_i0 PRJNA316313 417089 151 5.184211 7.82815861 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 52.8 3.11e-6   NR MCX7017443.1 2107588 g415703 i0 50 1.0728476821192101 54 21 95.4 1 5 148 738 791 MCX7017443.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Sumerlaeota bacterium] diamond 162 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31401959 31401959 PRJNA316313_P_NODE_413776_length_151_cov_5.473684_g412390_i0 PRJNA316313 413776 151 5.473684 8.26526284 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 61.6 2.32e-9   NR AXA35463.1 2250252 g412390 i0 48.1 1.52980132450331 77 13 99.3 1 2 151 470 546 AXA35463.1 N-acetylmuramic acid 6-phosphate etherase [Candidatus Sumerlaea chitinivorans] diamond 231 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;