RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA316313 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10592122 10592122 PRJNA316313_P_NODE_60829_length_244_cov_3.434783_g59443_i0 PRJNA316313 60829 244 3.434783 8.38087052 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 106 1.67e-18   NTclustered gi|2874253778|emb|OY969762.1| 2052149 g59443 i0 95.455 0.631147540983607 66 3 27 0 3 68 2631513 2631578 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.c.1 genome assembly, chromosome: 1 blastn 154 106 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30787003 30787003 PRJNA316313_P_NODE_307374_length_187_cov_2.380000_g305988_i0 PRJNA316313 307374 187 2.38 4.4506 Bacteria 2 Bacteria Bacteria 48.5 1.47e-4   NR OPZ63131.1 1852832 g305988 i0 54.3 4.37967914438503 46 14 73.8 1 1 138 212 250 OPZ63131.1 MAG: Chromosome partitioning protein ParA [Candidatus Aminicenantes bacterium ADurb.Bin508] diamond 819 48.9 0.991820040899796 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium ADurb.Bin508

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;