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contig_metadata

4 rows where bioproject = "PRJNA316313", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA316313 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28716785 28716785 PRJNA316313_P_NODE_250247_length_187_cov_2.853333_g248861_i0 PRJNA316313 250247 187 2.853333 5.33573271 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 42.4 0.0237   NR RAL56347.1 1914866 g248861 i0 42.4 0.946524064171123 59 19 70.6 1 170 39 64 122 RAL56347.1 arginine--tRNA ligase [Candidatus Gracilibacteria bacterium GN02-873] diamond 177 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
29680980 29680980 PRJNA316313_P_NODE_484850_length_150_cov_5.168142_g483464_i0 PRJNA316313 484850 150 5.168142 7.752213 Bacteria 2 Bacteria Bacteria 86.7 1.17e-20   NR RAL56399.1 1914866 g483464 i0 61.8 2.72 68 7 98 1 3 149 17 84 RAL56399.1 hypothetical protein BLM37_02690 [Candidatus Gracilibacteria bacterium GN02-873] diamond 408 87.4 0.991990846681922 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
29726778 29726778 PRJNA316313_P_NODE_164190_length_187_cov_4.160000_g162804_i0 PRJNA316313 164190 187 4.16 7.7792 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 45.4 0.00133   NR MDO4874311.1 2044595 g162804 i0 70.8 0.385026737967914 24 7 38.5 0 76 5 142 165 MDO4874311.1 VanZ family protein [Candidatus Altimarinota bacterium] diamond 72 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31275164 31275164 PRJNA316313_P_NODE_253495_length_187_cov_2.813333_g252109_i0 PRJNA316313 253495 187 2.813333 5.26093271 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.2 1.05e-6   NR MBB1554202.1 2044595 g252109 i0 100 0.401069518716578 25 0 40.1 0 112 186 20 44 MBB1554202.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 75 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;