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contig_metadata

11 rows where bioproject = "PRJNA315399", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 11 ✖

tax_phylum 1

  • Cossaviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
384855 384855 PRJNA315399_S_NODE_194321_length_151_cov_1.473684_g194120_i0 PRJNA315399 194321 151 1.473684 2.22526284 Flumine parvovirus 21 2940904 Viruses Viruses 246 5.27e-61   NTclustered gi|2235497434|gb|OM954006.1| 2940904 g194120 i0 96.026 3 151 6 100 0 1 151 1659 1809 Flumine parvovirus 21 nonstructural protein gene, complete cds blastn 453 246 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Flumine parvovirus 21
4212827 4212827 PRJNA315399_S_NODE_63664_length_201_cov_3.835366_g63463_i0 PRJNA315399 63664 201 3.835366 7.70908566 Gammapapillomavirus 8 1175850 Viruses Viruses 337 4.309999999999999e-88   NTclustered gi|557825766|gb|KC862317.1| 1420544 g63463 i0 99.459 0.920398009950249 185 1 92 0 15 199 4342 4526 Human papillomavirus type 168 isolate KC15, complete genome blastn 185 337 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 8
6763466 6763466 PRJNA315399_S_NODE_91266_length_183_cov_1.691781_g91065_i0 PRJNA315399 91266 183 1.691781 3.09595923 Betapapillomavirus 2 333924 Viruses Viruses 316 5.009999999999999e-82   NTclustered gi|1020186|gb|U31781.1|HPU31781 37955 g91065 i0 99.425 27.207650273224 174 1 95 0 10 183 6942 7115 Human papillomavirus type 23, complete genome blastn 4979 316 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
8038589 8038589 PRJNA315399_S_NODE_48607_length_216_cov_5.469274_g48406_i0 PRJNA315399 48607 216 5.469274 11.81363184 Betapapillomavirus 1 337051 Viruses Viruses 377 2.77e-100   NTclustered gi|1273499002|gb|MF588678.1| 337051 g48406 i0 100 13.9675925925926 204 0 94 0 1 204 6551 6348 Betapapillomavirus 1 isolate Beta01_m292c10, complete genome blastn 3017 377 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
18916896 18916896 PRJNA315399_P_NODE_115755_length_195_cov_9.968354_g115307_i0 PRJNA315399 115755 195 9.968354 19.4382903 Alphapolyomavirus 1891713 Viruses Viruses 141 3.5e-29   NTclustered gi|293595954|gb|HM011546.1| 493803 g115307 i0 100 70.8102564102564 76 0 75 0 98 173 2254 2179 Merkel cell polyomavirus isolate 15a, complete genome blastn 13808 141 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
20782741 20782741 PRJNA315399_P_NODE_115777_length_195_cov_9.715190_g115329_i0 PRJNA315399 115777 195 9.71519 18.9446205 Alphapolyomavirus quintihominis 1891726 Viruses Viruses 145 2.7e-30   NTclustered gi|1384960385|gb|MG241656.1| 493803 g115329 i0 96.591 55.7179487179487 88 2 45 1 108 195 1058 972 Merkel cell polyomavirus isolate M-B149.1 VP1 gene, partial cds blastn 10865 145 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
20785489 20785489 PRJNA315399_P_NODE_90077_length_206_cov_2.568047_g89629_i0 PRJNA315399 90077 206 2.568047 5.29017682 Alphapolyomavirus quintihominis 1891726 Viruses Viruses 350 5.7e-92   NTclustered gi|2426044208|gb|ON023016.1| 1891726 g89629 i0 100 91.747572815534 189 0 92 0 11 199 3707 3895 Alphapolyomavirus quintihominis isolate AA-39, complete genome blastn 18900 350 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
22743316 22743316 PRJNA315399_S_NODE_101998_length_177_cov_8.657143_g101797_i0 PRJNA315399 101998 177 8.657143 15.32314311 Betapapillomavirus 333922 Viruses Viruses 285 1.3499999999999998e-72   NTclustered gi|1559669468|gb|MH777305.2| 10566 g101797 i0 99.363 3.6045197740113 157 1 89 0 14 170 353 197 MAG: Human papillomavirus isolate HPV-mSK_163, partial genome blastn 638 285 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
24607700 24607700 PRJNA315399_P_NODE_163780_length_187_cov_7.446667_g163332_i0 PRJNA315399 163780 187 7.446667 13.92526729 Alphapapillomavirus 2 337039 Viruses Viruses 137 4.3e-28   NTclustered gi|9627257|ref|NC_001576.1| 333759 g163332 i0 100 2.98930481283422 74 0 73 0 104 177 7768 7841 Human papillomavirus type 10 genomic DNA blastn 559 137 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
25292064 25292064 PRJNA315399_P_NODE_3380_length_439_cov_6.594527_g3050_i0 PRJNA315399 3380 439 6.594527 28.94997353 Alphapolyomavirus 1891713 Viruses Viruses 355 2.89e-93   NTclustered gi|293595944|gb|HM011544.1| 493803 g3050 i0 100 71.3485193621868 192 0 82 0 12 203 330 521 Merkel cell polyomavirus isolate 14a, complete genome blastn 31322 355 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus quintihominis
29821437 29821437 PRJNA315399_P_NODE_403671_length_161_cov_4.080645_g403223_i0 PRJNA315399 403671 161 4.080645 6.56983845 Papillomavirus homo7299 3116969 Viruses Viruses 52.8 3.53e-6   NR DBA51342.1 3116969 g403223 i0 87.5 0.894409937888199 24 3 44.7 0 145 74 269 292 DBA51342.1 MAG TPA_asm: E1 [Papillomavirus homo7299] diamond 144 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Papillomavirus homo7299

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;