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contig_metadata

8 rows where bioproject = "PRJNA315399" and tax_phylum = "Candidatus Shapironibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Shapironibacteriota · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26821394 26821394 PRJNA315399_P_NODE_357561_length_167_cov_18.292308_g357113_i0 PRJNA315399 357561 167 18.292308 30.54815436 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 54.3 1.1e-6   NR MDD4938280.1 2053613 g357113 i0 54.5 3.66467065868263 44 20 79 0 147 16 316 359 MDD4938280.1 glycosyltransferase family 39 protein [Candidatus Shapirobacteria bacterium] diamond 612 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
27105876 27105876 PRJNA315399_P_NODE_495642_length_151_cov_8.526316_g495194_i0 PRJNA315399 495642 151 8.526316 12.87473716 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 43.1 0.00756   NR MCW1948871.1 2053613 g495194 i0 55.9 0.675496688741722 34 15 67.5 0 3 104 376 409 MCW1948871.1 ABC transporter ATP-binding protein/permease [Candidatus Shapirobacteria bacterium] diamond 102 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
27643281 27643281 PRJNA315399_P_NODE_442884_length_157_cov_3.083333_g442436_i0 PRJNA315399 442884 157 3.083333 4.84083281 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 66.6 3.63e-11   NR MDD4135686.1 2053613 g442436 i0 60 0.955414012738854 50 20 95.5 0 1 150 287 336 MDD4135686.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Shapirobacteria bacterium] diamond 150 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
27990510 27990510 PRJNA315399_P_NODE_465565_length_154_cov_6.905983_g465117_i0 PRJNA315399 465565 154 6.905983 10.63521382 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 48.5 9e-5   NR MDD4106349.1 2053613 g465117 i0 54.9 1.88961038961039 51 17 87.7 3 12 146 20 70 MDD4106349.1 LytR C-terminal domain-containing protein [Candidatus Shapirobacteria bacterium] diamond 291 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
28274507 28274507 PRJNA315399_S_NODE_68406_length_197_cov_5.625000_g68205_i0 PRJNA315399 68406 197 5.625 11.08125 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 105 2.89e-25   NR MCW1949520.1 2053613 g68205 i0 85.2 0.928934010152284 61 9 92.9 0 192 10 240 300 MCW1949520.1 glycosyltransferase [Candidatus Shapirobacteria bacterium] diamond 183 105 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
31243499 31243499 PRJNA315399_S_NODE_88235_length_184_cov_5.578231_g88034_i0 PRJNA315399 88235 184 5.578231 10.26394504 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 102 5.35e-24   NR MDD4106985.1 2053613 g88034 i0 82.5 0.929347826086957 57 10 92.9 0 13 183 30 86 MDD4106985.1 M50 family metallopeptidase [Candidatus Shapirobacteria bacterium] diamond 171 102 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
32097502 32097502 PRJNA315399_P_NODE_312318_length_178_cov_2.957447_g311870_i0 PRJNA315399 312318 178 2.957447 5.26425566 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 43.5 0.00837   NR MCW1949174.1 2053613 g311870 i0 75 0.404494382022472 24 6 40.4 0 106 177 121 144 MCW1949174.1 phosphoglycerate kinase [Candidatus Shapirobacteria bacterium] diamond 72 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
32886802 32886802 PRJNA315399_P_NODE_130220_length_192_cov_2.787097_g129772_i0 PRJNA315399 130220 192 2.787097 5.35122624 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 58.2 6.66e-8   NR MFA6361276.1 2053613 g129772 i0 81.8 0.515625 33 6 51.6 0 93 191 358 390 MFA6361276.1 cell division protein FtsA [Candidatus Shapirobacteria bacterium] diamond 99 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;