RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA315399" and tax_phylum = "Candidatus Portnoyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Portnoyibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29807445 29807445 PRJNA315399_P_NODE_78131_length_212_cov_5.274286_g77683_i0 PRJNA315399 78131 212 5.274286 11.18148632 Bacteria 2 Bacteria Bacteria 64.3 6.13e-10   NR PIZ69265.1 1974798 g77683 i0 66 1.99528301886792 47 16 66.5 0 42 182 130 176 PIZ69265.1 MAG: hypothetical protein COY10_01735 [Candidatus Portnoybacteria bacterium CG_4_10_14_0_2_um_filter_43_36] diamond 423 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG_4_10_14_0_2_um_filter_43_36
30643056 30643056 PRJNA315399_S_NODE_70393_length_196_cov_2.182390_g70192_i0 PRJNA315399 70393 196 2.18239 4.2774844 Candidatus Portnoybacteria bacterium 2053593 Bacteria Bacteria 62 3.23e-9   NR MBD3282083.1 2053593 g70192 i0 55 0.918367346938776 60 27 91.8 0 16 195 129 188 MBD3282083.1 hypothetical protein [Candidatus Portnoybacteria bacterium] diamond 180 62 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium
31148229 31148229 PRJNA315399_P_NODE_497815_length_151_cov_5.122807_g497367_i0 PRJNA315399 497815 151 5.122807 7.73543857 Candidatus Portnoybacteria bacterium CG 2053593 Bacteria Bacteria 42 0.0194   NR PIU74874.1 1974809 g497367 i0 47.7 0.874172185430464 44 23 87.4 0 3 134 161 204 PIU74874.1 MAG: hypothetical protein COS76_03785 [Candidatus Portnoybacteria bacterium CG06_land_8_20_14_3_00_39_12] diamond 132 42 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG06_land_8_20_14_3_00_39_12
32399966 32399966 PRJNA315399_S_NODE_47639_length_217_cov_10.866667_g47438_i0 PRJNA315399 47639 217 10.866667 23.58066739 Bacteria 2 Bacteria Bacteria 58.2 9.88e-8   NR PIZ69265.1 1974798 g47438 i0 57.9 2.36405529953917 57 24 78.8 0 10 180 139 195 PIZ69265.1 MAG: hypothetical protein COY10_01735 [Candidatus Portnoybacteria bacterium CG_4_10_14_0_2_um_filter_43_36] diamond 513 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG_4_10_14_0_2_um_filter_43_36

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;