RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA315399" and tax_phylum = "Candidatus Glassiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Glassiibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4894376 4894376 PRJNA315399_S_NODE_124_length_1710_cov_32.028093_g122_i0 PRJNA315399 124 1710 32.028093 547.6803903 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 106 1.2699999999999999e-23   NR HUU89496.1 2602803 g122 i0 55.3 0.164912280701754 94 41 16.5 1 1366 1647 7 99 HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 282 106 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
13820261 13820261 PRJNA315399_S_NODE_2311_length_562_cov_21.521905_g122_i2 PRJNA315399 2311 562 21.521905 120.9531061 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 106 2.85e-26   NR HUU89496.1 2602803 g122 i2 55.3 0.501779359430605 94 41 50.2 1 345 64 7 99 HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 282 106 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
20192899 20192899 PRJNA315399_S_NODE_216_length_1073_cov_36.394788_g122_i1 PRJNA315399 216 1073 36.394788 390.51607524 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 106 2.24e-24   NR HUU89496.1 2602803 g122 i1 55.3 0.262814538676608 94 41 26.3 1 345 64 7 99 HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 282 106 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
28937731 28937731 PRJNA315399_P_NODE_84688_length_208_cov_9.578947_g84240_i0 PRJNA315399 84688 208 9.578947 19.92420976 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 64.3 3.58e-10   NR HUU89524.1 2602803 g84240 i0 64 0.721153846153846 50 18 72.1 0 37 186 163 212 HUU89524.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 150 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
29348222 29348222 PRJNA315399_S_NODE_61149_length_203_cov_5.385542_g60948_i0 PRJNA315399 61149 203 5.385542 10.93265026 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 42 0.0365   NR HUU87852.1 2602803 g60948 i0 41.9 0.635467980295567 43 25 63.5 0 24 152 182 224 HUU87852.1 metallophosphatase domain-containing protein [Candidatus Glassbacteria bacterium] diamond 129 42 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
29726693 29726693 PRJNA315399_P_NODE_372310_length_165_cov_3.578125_g371862_i0 PRJNA315399 372310 165 3.578125 5.90390625 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 42.7 0.013   NR MFQ6102923.1 2602803 g371862 i0 42.9 0.890909090909091 49 26 89.1 1 12 158 990 1036 MFQ6102923.1 DNA-directed RNA polymerase subunit beta [Candidatus Glassbacteria bacterium] diamond 147 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
30579701 30579701 PRJNA315399_P_NODE_86593_length_207_cov_8.494118_g86145_i0 PRJNA315399 86593 207 8.494118 17.58282426 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 71.2 3.77e-14   NR HUU89496.1 2602803 g86145 i0 57.1 0.91304347826087 63 26 91.3 1 17 205 19 80 HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 189 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;