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contig_metadata

33 rows where bioproject = "PRJNA315399", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 33 ✖

tax_phylum 1

  • Armatimonadota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
382729 382729 PRJNA315399_P_NODE_351741_length_169_cov_3.204545_g351293_i0 PRJNA315399 351741 169 3.204545 5.41568105 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 97.1 1.37e-23   NR HVK03322.1 2933160 g351293 i0 92 0.887573964497041 50 4 88.8 0 152 3 25 74 HVK03322.1 ABC transporter ATP-binding protein [Armatimonadaceae bacterium] diamond 150 97.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
20192323 20192323 PRJNA315399_P_NODE_490236_length_152_cov_3.391304_g489788_i0 PRJNA315399 490236 152 3.391304 5.15478208 Fimbriimonas 1005038 Bacteria Bacteria 122 9.34e-24   NTclustered gi|663071213|gb|CP007139.1| 661478 g489788 i0 96 312.355263157895 75 3 49 0 70 144 26972 27046 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 47478 122 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
22061466 22061466 PRJNA315399_S_NODE_26298_length_258_cov_2.067873_g26097_i0 PRJNA315399 26298 258 2.067873 5.33511234 Armatimonadota bacterium 2033014 Bacteria Bacteria 111 2.14e-26   NR MBV9849465.1 2033014 g26097 i0 81.3 0.744186046511628 64 12 74.4 0 3 194 521 584 MBV9849465.1 AAA family ATPase [Armatimonadota bacterium] diamond 192 111 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
23334405 23334405 PRJNA315399_P_NODE_294419_length_179_cov_3.274648_g293971_i0 PRJNA315399 294419 179 3.274648 5.86161992 Capsulimonas corticalis 2219043 Bacteria Bacteria 121 4.0999999999999997e-23   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g293971 i0 95.946 0.815642458100559 74 3 41 0 104 177 223518 223591 Capsulimonas corticalis AX-7 DNA, complete genome blastn 146 121 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
27011012 27011012 PRJNA315399_P_NODE_174282_length_186_cov_11.248322_g173834_i0 PRJNA315399 174282 186 11.248322 20.92187892 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.4 0.0249   NR MBC8139693.1 2033014 g173834 i0 37.1 1.12903225806452 70 28 87.1 1 177 16 16 85 MBC8139693.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 210 42.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27042772 27042772 PRJNA315399_P_NODE_273982_length_180_cov_3.846154_g273534_i0 PRJNA315399 273982 180 3.846154 6.9230772 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 74.3 1.14e-13   NR HVK05262.1 2933160 g273534 i0 59.7 1.03333333333333 62 19 93.3 2 5 172 342 403 HVK05262.1 sulfatase-like hydrolase/transferase [Armatimonadaceae bacterium] diamond 186 74.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
27074343 27074343 PRJNA315399_P_NODE_130322_length_192_cov_2.690323_g129874_i0 PRJNA315399 130322 192 2.690323 5.16542016 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 40.8 0.0473   NR HVT12097.1 2682144 g129874 i0 43.1 0.796875 51 19 79.7 2 10 162 6 46 HVT12097.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 153 40.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27516836 27516836 PRJNA315399_S_NODE_171663_length_155_cov_6.847458_g171462_i0 PRJNA315399 171663 155 6.847458 10.6135599 Armatimonadota bacterium 2033014 Bacteria Bacteria 68.2 3.94e-13   NR HAY14354.1 2033014 g171462 i0 64.7 0.987096774193548 51 18 98.7 0 154 2 1 51 HAY14354.1 hypothetical protein [Armatimonadota bacterium] diamond 153 68.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27534256 27534256 PRJNA315399_S_NODE_136103_length_165_cov_2.054688_g135902_i0 PRJNA315399 136103 165 2.054688 3.3902352 Armatimonadota 67819 Bacteria Bacteria 55.5 3.59e-7   NR HLK55071.1 2739509 g135902 i0 43.5 3.41818181818182 46 26 83.6 0 159 22 115 160 HLK55071.1 H-X9-DG-CTERM domain-containing protein [Chthonomonadaceae bacterium] diamond 564 55.5 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27548388 27548388 PRJNA315399_S_NODE_89524_length_184_cov_1.204082_g89323_i0 PRJNA315399 89524 184 1.204082 2.21551088 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 99 9.98e-23   NR MCS6775517.1 2739509 g89323 i0 84.2 2.78804347826087 57 9 92.9 0 183 13 327 383 MCS6775517.1 LptF/LptG family permease [Chthonomonadaceae bacterium] diamond 513 99 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27738103 27738103 PRJNA315399_P_NODE_136624_length_190_cov_23.490196_g136176_i0 PRJNA315399 136624 190 23.490196 44.6313724 Armatimonas rosea 685828 Bacteria Bacteria 47.8 3.21e-4   NR WP_184192364.1 685828 g136176 i0 80.8 0.410526315789474 26 5 41.1 0 174 97 632 657 WP_184192364.1 PAS domain-containing sensor histidine kinase [Armatimonas rosea] diamond 78 47.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
27832491 27832491 PRJNA315399_P_NODE_48284_length_240_cov_3.256158_g47836_i0 PRJNA315399 48284 240 3.256158 7.8147792 Armatimonadota bacterium 2033014 Bacteria Bacteria 68.6 2.97e-11   NR MBW3634909.1 2033014 g47836 i0 46.7 1.3375 107 30 100 1 1 240 316 422 MBW3634909.1 FtsX-like permease family protein [Armatimonadota bacterium] diamond 321 68.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27895568 27895568 PRJNA315399_P_NODE_329285_length_175_cov_5.514493_g328837_i0 PRJNA315399 329285 175 5.514493 9.65036275 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 70.1 2.49e-12   NR HVK06563.1 2933160 g328837 i0 49.3 1.25142857142857 73 17 90.9 1 3 161 150 222 HVK06563.1 pectinesterase family protein [Armatimonadaceae bacterium] diamond 219 70.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
28400848 28400848 PRJNA315399_P_NODE_390206_length_162_cov_11.736000_g389758_i0 PRJNA315399 390206 162 11.736 19.01232 Armatimonadota bacterium 2033014 Bacteria Bacteria 92 7.88e-21   NR MBW3635570.1 2033014 g389758 i0 64 4.16666666666667 75 5 98.1 1 160 2 10 84 MBW3635570.1 phytanoyl-CoA dioxygenase family protein [Armatimonadota bacterium] diamond 675 92 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28685187 28685187 PRJNA315399_P_NODE_232807_length_183_cov_2.575342_g232359_i0 PRJNA315399 232807 183 2.575342 4.71287586 Armatimonadota bacterium 2033014 Bacteria Bacteria 58.2 5.24e-9   NR MES2461078.1 2033014 g232359 i0 89.3 0.459016393442623 28 3 45.9 0 84 1 4 31 MES2461078.1 FmdB family zinc ribbon protein [Armatimonadota bacterium] diamond 84 58.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28779626 28779626 PRJNA315399_P_NODE_71767_length_216_cov_11.229050_g71319_i0 PRJNA315399 71767 216 11.22905 24.254748 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 56.2 4.68e-7   NR HVK07075.1 2933160 g71319 i0 72.2 1 36 10 50 0 109 216 5 40 HVK07075.1 hypothetical protein [Armatimonadaceae bacterium] diamond 216 56.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
28874391 28874391 PRJNA315399_P_NODE_310088_length_178_cov_3.489362_g309640_i0 PRJNA315399 310088 178 3.489362 6.21106436 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.5 0.00642   NR MES2462905.1 2033014 g309640 i0 88 0.421348314606742 25 3 42.1 0 2 76 126 150 MES2462905.1 RNA 2',3'-cyclic phosphodiesterase [Armatimonadota bacterium] diamond 75 43.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28937694 28937694 PRJNA315399_P_NODE_238168_length_182_cov_7.013793_g237720_i0 PRJNA315399 238168 182 7.013793 12.76510326 Armatimonadota bacterium 2033014 Bacteria Bacteria 66.2 1.35e-11   NR MCX6379030.1 2033014 g237720 i0 55.9 0.972527472527473 59 23 97.3 1 4 180 98 153 MCX6379030.1 transcription termination/antitermination protein NusG [Armatimonadota bacterium] diamond 177 66.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28969319 28969319 PRJNA315399_S_NODE_140468_length_163_cov_9.214286_g140267_i0 PRJNA315399 140468 163 9.214286 15.01928618 Armatimonadota bacterium 2033014 Bacteria Bacteria 69.7 3.84e-12   NR MBC8143576.1 2033014 g140267 i0 64.7 4.41717791411043 51 18 93.9 0 153 1 376 426 MBC8143576.1 hypothetical protein [Armatimonadota bacterium] diamond 720 69.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29284741 29284741 PRJNA315399_P_NODE_187169_length_185_cov_16.790541_g186721_i0 PRJNA315399 187169 185 16.790541 31.06250085 Armatimonadota bacterium 2033014 Bacteria Bacteria 63.9 5.72e-10   NR MBC8103698.1 2033014 g186721 i0 83.3 0.583783783783784 36 6 58.4 0 118 11 516 551 MBC8103698.1 PD40 domain-containing protein [Armatimonadota bacterium] diamond 108 63.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29758407 29758407 PRJNA315399_P_NODE_313991_length_178_cov_2.645390_g313543_i0 PRJNA315399 313991 178 2.64539 4.7087942 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.5 4.3e-14   NR MES2461967.1 2033014 g313543 i0 54.7 1.26404494382022 75 17 97.8 1 176 3 442 516 MES2461967.1 hypothetical protein [Armatimonadota bacterium] diamond 225 75.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30264267 30264267 PRJNA315399_P_NODE_228652_length_183_cov_3.636986_g228204_i0 PRJNA315399 228652 183 3.636986 6.65568438 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 48.9 1.1e-4   NR MBC7529561.1 2739509 g228204 i0 82.1 1.36065573770492 28 5 45.9 0 2 85 610 637 MBC7529561.1 diguanylate cyclase [Chthonomonadaceae bacterium] diamond 249 48.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30737783 30737783 PRJNA315399_P_NODE_216154_length_184_cov_2.632653_g215706_i0 PRJNA315399 216154 184 2.632653 4.84408152 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 47.4 1.7e-4   NR MBL8065871.1 2739509 g215706 i0 69.2 0.423913043478261 26 8 42.4 0 179 102 59 84 MBL8065871.1 DinB family protein [Chthonomonadaceae bacterium] diamond 78 47.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30864222 30864222 PRJNA315399_P_NODE_507834_length_150_cov_5.814159_g507386_i0 PRJNA315399 507834 150 5.814159 8.7212385 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.4 3.49e-6   NR MBV9850431.1 2033014 g507386 i0 87.5 0.48 24 3 48 0 2 73 209 232 MBV9850431.1 phytanoyl-CoA dioxygenase family protein [Armatimonadota bacterium] diamond 72 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30896105 30896105 PRJNA315399_S_NODE_60654_length_204_cov_1.712575_g60453_i0 PRJNA315399 60654 204 1.712575 3.493653 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.4 0.0307   NR HPT99839.1 2033014 g60453 i0 41.7 1.41176470588235 48 24 70.6 1 27 170 838 881 HPT99839.1 fibronectin type III domain-containing protein [Armatimonadota bacterium] diamond 288 42.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30927692 30927692 PRJNA315399_S_NODE_121534_length_170_cov_1.270677_g121333_i0 PRJNA315399 121534 170 1.270677 2.1601509 Armatimonadota bacterium 2033014 Bacteria Bacteria 79 2.38e-15   NR MBS1720929.1 2033014 g121333 i0 67.9 1.97647058823529 56 18 98.8 0 169 2 448 503 MBS1720929.1 methionine--tRNA ligase [Armatimonadota bacterium] diamond 336 79 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31370191 31370191 PRJNA315399_P_NODE_225116_length_183_cov_5.054795_g224668_i0 PRJNA315399 225116 183 5.054795 9.25027485 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.4 3.84e-4   NR MES2460222.1 2033014 g224668 i0 95.2 0.344262295081967 21 1 34.4 0 20 82 272 292 MES2460222.1 GNAT family N-acetyltransferase [Armatimonadota bacterium] diamond 63 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31907767 31907767 PRJNA315399_S_NODE_194837_length_151_cov_0.982456_g194636_i0 PRJNA315399 194837 151 0.982456 1.48350856 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 64.3 2.38e-10   NR MCS6775517.1 2739509 g194636 i0 70.2 0.933774834437086 47 14 93.4 0 3 143 237 283 MCS6775517.1 LptF/LptG family permease [Chthonomonadaceae bacterium] diamond 141 64.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32034367 32034367 PRJNA315399_S_NODE_3978_length_474_cov_10.848970_g3791_i0 PRJNA315399 3978 474 10.84897 51.4241178 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 77 4.52e-13   NR MCU0315867.1 2682144 g3791 i0 31.5 0.80379746835443 127 68 77.8 2 50 418 421 532 MCU0315867.1 D-alanyl-D-alanine carboxypeptidase family protein [Fimbriimonadaceae bacterium] diamond 381 77 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32319324 32319324 PRJNA315399_P_NODE_118219_length_195_cov_2.531646_g117771_i0 PRJNA315399 118219 195 2.531646 4.9367097 Armatimonadota bacterium 2033014 Bacteria Bacteria 95.5 4.1100000000000006e-21   NR MES2463113.1 2033014 g117771 i0 76.1 1.03076923076923 67 5 86.2 1 16 183 109 175 MES2463113.1 histidine kinase [Armatimonadota bacterium] diamond 201 95.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32572383 32572383 PRJNA315399_P_NODE_393739_length_162_cov_4.776000_g393291_i0 PRJNA315399 393739 162 4.776 7.73712 Armatimonadota bacterium 2033014 Bacteria Bacteria 41.2 0.0431   NR NLN76546.1 2033014 g393291 i0 72 0.462962962962963 25 7 46.3 0 13 87 52 76 NLN76546.1 glycerophosphodiester phosphodiesterase [Armatimonadota bacterium] diamond 75 41.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32698042 32698042 PRJNA315399_S_NODE_55200_length_209_cov_3.465116_g54999_i0 PRJNA315399 55200 209 3.465116 7.24209244 Armatimonadota bacterium 2033014 Bacteria Bacteria 106 7.17e-26   NR MCX6379835.1 2033014 g54999 i0 71.2 0.947368421052632 66 19 94.7 0 7 204 78 143 MCX6379835.1 alpha/beta hydrolase [Armatimonadota bacterium] diamond 198 106 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32792369 32792369 PRJNA315399_S_NODE_86960_length_185_cov_3.621622_g86759_i0 PRJNA315399 86960 185 3.621622 6.7000007 Armatimonadota bacterium 2033014 Bacteria Bacteria 112 4.48e-27   NR HAY13916.1 2033014 g86759 i0 91.8 1.97837837837838 61 5 98.9 0 1 183 37 97 HAY13916.1 methylaspartate mutase [Armatimonadota bacterium] diamond 366 112 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;