RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA315399", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 6 ✖

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA315399 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1657508 1657508 PRJNA315399_P_NODE_353002_length_168_cov_628.885496_g352554_i0 PRJNA315399 353002 168 628.885496 1056.52763328 Zebrafish influenza B-like virus RQ01 Viruses Viruses 104 3.84e-18   NTclustered gi|321496171|gb|JF275949.1| RQ01 g352554 i0 96.774 56.7916666666667 62 2 37 0 29 90 1775 1714 Influenza A virus (A/swine/Shandong/N1/2009(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds blastn 9541 104 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
3616272 3616272 PRJNA315399_P_NODE_214723_length_184_cov_3.000000_g214275_i0 PRJNA315399 214723 184 3 5.52 root 1 Root_unresolved Root_unresolved 141 3.26e-29   NTclustered gi|2575940499|gb|OQ603621.1| 11292 g214275 i0 100 266.336956521739 76 0 41 0 10 85 11989 11914 Lyssavirus rabies isolate RABV_GEO_17, complete genome blastn 49006 141 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Lyssavirus Lyssavirus rabies
7445084 7445084 PRJNA315399_S_NODE_96946_length_180_cov_2.440559_g96745_i0 PRJNA315399 96946 180 2.440559 4.3930062 Vesiculovirus 11271 Viruses Viruses 311 2.28e-80   NTclustered gi|61832|emb|V01213.1| 11276 g96745 i0 98.851 96.4777777777778 174 2 97 0 7 180 468 295 Vesicular stomatitis virus gene fragment encoding the G protein blastn 17366 311 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus
8036890 8036890 PRJNA315399_P_NODE_508387_length_150_cov_5.185841_g507939_i0 PRJNA315399 508387 150 5.185841 7.7787615 Formivirus gorytis 2844681 Viruses Viruses 52.8 0.012   NTclustered gi|2500379381|ref|NC_076500.1| 2789450 g507939 i0 100 0.186666666666667 28 0 19 0 87 114 4121 4094 Hymenopteran orino-related virus OKIAV85 nucleoprotein (QKO73_gp1), hypothetical protein (QKO73_gp2), hypothetical protein (QKO73_gp3), glycoprotein (QKO73_gp4), and RdRp (QKO73_gp5) genes, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Nyamiviridae Formivirus Formivirus gorytis
28779582 28779582 PRJNA315399_P_NODE_288267_length_179_cov_4.950704_g287819_i0 PRJNA315399 288267 179 4.950704 8.86176016 brine shrimp rhabdovirus 1 2900475 Viruses Viruses 65.9 1.11e-10   NR UNI73977.1 2900475 g287819 i0 50 0.972067039106145 58 29 97.2 0 175 2 70 127 UNI73977.1 MAG: RNA-dependent RNA polymerase [brine shrimp rhabdovirus 1] diamond 174 65.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   brine shrimp rhabdovirus 1
29853333 29853333 PRJNA315399_P_NODE_341871_length_171_cov_26.343284_g341423_i0 PRJNA315399 341871 171 26.343284 45.04701564 brine shrimp rhabdovirus 1 2900475 Viruses Viruses 59.7 1.43e-8   NR UNI73976.1 2900475 g341423 i0 51.1 0.824561403508772 47 23 82.5 0 163 23 374 420 UNI73976.1 MAG: glycoprotein [brine shrimp rhabdovirus 1] diamond 141 59.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   brine shrimp rhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;