RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA315399", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 21 ✖

tax_kingdom 1

  • Metazoa · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2934134 2934134 PRJNA315399_P_NODE_485443_length_152_cov_7.034783_g484995_i0 PRJNA315399 485443 152 7.034783 10.69287016 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 62.1 2.06e-5   NTclustered gi|2037992070|ref|XM_041608919.1| 7654 g484995 i0 91.304 0.302631578947368 46 3 30 1 99 144 3660 3616 PREDICTED: Lytechinus variegatus WD repeat-containing protein 93-like (LOC121415631), mRNA blastn 46 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
6762305 6762305 PRJNA315399_S_NODE_164226_length_157_cov_3.758333_g164025_i0 PRJNA315399 164226 157 3.758333 5.90058281 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|2707359961|ref|XM_054893702.2| 7653 g164025 i0 100 0.184713375796178 29 0 18 0 122 150 4148 4120 PREDICTED: Lytechinus pictus thioredoxin reductase 1, cytoplasmic-like (LOC129255336), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
8036434 8036434 PRJNA315399_P_NODE_433547_length_158_cov_3.190083_g433099_i0 PRJNA315399 433547 158 3.190083 5.04033114 Diadema antillarum 105358 Echinodermata other_Eukaryota 71.3 3.61e-8   NTclustered gi|2919469585|ref|XM_071643940.1| 105358 g433099 i0 95.455 3.21518987341772 44 2 28 0 103 146 1273 1230 PREDICTED: Diadema antillarum protein Red-like (LOC139733097), mRNA blastn 508 71.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
9313774 9313774 PRJNA315399_S_NODE_8748_length_364_cov_34.388379_g8547_i0 PRJNA315399 8748 364 34.388379 125.17369956 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 198 4.19e-46   NTclustered gi|2038000323|ref|XM_041613285.1| 7654 g8547 i0 84.236 13.3434065934066 203 32 56 0 9 211 297 499 PREDICTED: Lytechinus variegatus calmodulin-beta-like (LOC121419026), mRNA blastn 4857 198 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
10587018 10587018 PRJNA315399_P_NODE_426369_length_159_cov_1.459016_g425921_i0 PRJNA315399 426369 159 1.459016 2.31983544 Anneissia japonica 1529436 Echinodermata other_Eukaryota 56.5 0.001   NTclustered gi|1826658313|ref|XM_033261041.1| 1529436 g425921 i0 97.059 0.389937106918239 34 0 21 1 125 157 4898 4931 PREDICTED: Anneissia japonica kin of IRRE-like protein 2 (LOC117116909), mRNA blastn 62 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
13135609 13135609 PRJNA315399_P_NODE_218631_length_184_cov_1.653061_g218183_i0 PRJNA315399 218631 184 1.653061 3.04163224 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|2707360636|ref|XM_064097906.1| 7653 g218183 i0 100 0.157608695652174 29 0 16 0 33 61 1679 1651 PREDICTED: Lytechinus pictus uncharacterized LOC129256176 (LOC129256176), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
14412229 14412229 PRJNA315399_P_NODE_443492_length_157_cov_2.816667_g443044_i0 PRJNA315399 443492 157 2.816667 4.42216719 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.013   NTclustered gi|1752353858|ref|XM_030982288.1| 7668 g443044 i0 100 0.535031847133758 28 0 18 0 112 139 3365 3338 PREDICTED: Strongylocentrotus purpuratus G-protein coupled receptor GRL101 (LOC581458), transcript variant X1, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
16960492 16960492 PRJNA315399_P_NODE_41354_length_250_cov_3.192488_g40907_i0 PRJNA315399 41354 250 3.192488 7.98122 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|1229183233|ref|XM_022249572.1| 133434 g40907 i0 100 0.336 28 0 11 0 197 224 1446 1473 PREDICTED: Acanthaster planci kxDL motif-containing protein 1-like (LOC110987120), transcript variant X2, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
20785710 20785710 PRJNA315399_S_NODE_114537_length_172_cov_4.348148_g114336_i0 PRJNA315399 114537 172 4.348148 7.47881456 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.014   NTclustered gi|1826644441|ref|XM_033254463.1| 1529436 g114336 i0 100 0.162790697674419 28 0 16 0 78 105 3412 3385 PREDICTED: Anneissia japonica adhesion G protein-coupled receptor E3-like (LOC117111531), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
23336712 23336712 PRJNA315399_S_NODE_17279_length_293_cov_9.269531_g17078_i0 PRJNA315399 17279 293 9.269531 27.15972583 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.027   NTclustered gi|1229133265|ref|XM_022255687.1| 133434 g17078 i0 100 0.191126279863481 28 0 10 0 237 264 2814 2841 PREDICTED: Acanthaster planci sialidase-2-like (LOC110990601), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
27137136 27137136 PRJNA315399_P_NODE_109642_length_197_cov_13.018750_g109194_i0 PRJNA315399 109642 197 13.01875 25.6469375 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 50.8 1.22e-5   NR KAJ8047569.1 206669 g109194 i0 42.9 0.746192893401015 49 28 74.6 0 20 166 18 66 KAJ8047569.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 147 50.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
27706625 27706625 PRJNA315399_P_NODE_468624_length_154_cov_3.914530_g468176_i0 PRJNA315399 468624 154 3.91453 6.0283762 Diadema antillarum 105358 Echinodermata other_Eukaryota 45.1 0.00172   NR XP_071500975.1 105358 g468176 i0 48.8 1.67532467532468 43 22 83.8 0 142 14 410 452 XP_071500975.1 uncharacterized protein [Diadema antillarum] diamond 258 45.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
28671012 28671012 PRJNA315399_P_NODE_24067_length_284_cov_8.797571_g23622_i0 PRJNA315399 24067 284 8.797571 24.98510164 Metazoa 33208 Echinodermata other_Eukaryota 44.7 0.0133   NR XP_041466934.1 7654 g23622 i0 43.6 0.73943661971831 39 22 41.2 0 4 120 1812 1850 XP_041466934.1 uncharacterized protein LOC121417330 [Lytechinus variegatus] diamond 210 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
29568998 29568998 PRJNA315399_P_NODE_103310_length_200_cov_3.509202_g102862_i0 PRJNA315399 103310 200 3.509202 7.018404 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 43.1 0.0149   NR KAJ8023755.1 206669 g102862 i0 64.3 0.855 28 10 42 0 114 31 131 158 KAJ8023755.1 hypothetical protein HOLleu_36289 [Holothuria leucospilota] diamond 171 43.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29586248 29586248 PRJNA315399_P_NODE_434850_length_158_cov_2.595041_g434402_i0 PRJNA315399 434850 158 2.595041 4.10016478 Metazoa 33208 Echinodermata other_Eukaryota 42.4 0.0162   NR XP_033630752.1 7604 g434402 i0 45.7 4.23417721518987 46 21 79.7 1 136 11 379 424 XP_033630752.1 uncharacterized protein LOC117292714 [Asterias rubens] diamond 669 42.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29695049 29695049 PRJNA315399_P_NODE_466770_length_154_cov_5.341880_g466322_i0 PRJNA315399 466770 154 5.34188 8.2264952 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 51.2 1.14e-5   NR KAJ8032438.1 206669 g466322 i0 44 3.56493506493507 50 28 97.4 0 5 154 645 694 KAJ8032438.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 549 51.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29695066 29695066 PRJNA315399_S_NODE_113170_length_173_cov_1.852941_g112969_i0 PRJNA315399 113170 173 1.852941 3.20558793 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 49.3 6.6e-5   NR KAJ8018601.1 206669 g112969 i0 54.8 2.98265895953757 31 14 53.8 0 16 108 141 171 KAJ8018601.1 hypothetical protein HOLleu_43322 [Holothuria leucospilota] diamond 516 49.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30011352 30011352 PRJNA315399_P_NODE_346431_length_170_cov_5.781955_g345983_i0 PRJNA315399 346431 170 5.781955 9.8293235 Lytechinus pictus 7653 Echinodermata other_Eukaryota 51.2 1.41e-5   NR XP_063951714.1 7653 g345983 i0 45.2 1.48235294117647 42 23 74.1 0 162 37 293 334 XP_063951714.1 uncharacterized protein LOC135153223 [Lytechinus pictus] diamond 252 51.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
30186547 30186547 PRJNA315399_P_NODE_28872_length_274_cov_1.738397_g28427_i0 PRJNA315399 28872 274 1.738397 4.76320778 Metazoa 33208 Echinodermata other_Eukaryota 57.8 2.75e-7   NR KAJ8030849.1 206669 g28427 i0 39.8 6.38321167883212 83 43 83.2 1 30 257 607 689 KAJ8030849.1 Zinc finger MYM-type protein 1 [Holothuria leucospilota] diamond 1749 57.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30642974 30642974 PRJNA315399_P_NODE_332213_length_174_cov_10.321168_g331765_i0 PRJNA315399 332213 174 10.321168 17.95883232 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.3 0.00308   NR KAJ8027222.1 206669 g331765 i0 45.9 1.31034482758621 37 20 63.8 0 127 17 149 185 KAJ8027222.1 hypothetical protein HOLleu_32304 [Holothuria leucospilota] diamond 228 44.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32034323 32034323 PRJNA315399_P_NODE_413038_length_160_cov_4.089431_g412590_i0 PRJNA315399 413038 160 4.089431 6.5430896 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.7 0.00254   NR KAJ8025022.1 206669 g412590 i0 34.7 0.91875 49 32 91.9 0 10 156 1 49 KAJ8025022.1 putative DNA polymerase [Holothuria leucospilota] diamond 147 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;