RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315399", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11863969 11863969 PRJNA315399_S_NODE_46330_length_219_cov_4.620879_g46129_i0 PRJNA315399 46330 219 4.620879 10.11972501 Candidatus Lustribacter sp. 3069335 Bacteria Bacteria 118 1.97e-29   NR HEY5349113.1 3069335 g46129 i0 88.4 0.945205479452055 69 8 94.5 0 219 13 359 427 HEY5349113.1 DNA repair protein RadA [Candidatus Lustribacter sp.] diamond 207 118 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Lustribacter Candidatus Lustribacter sp.
27769608 27769608 PRJNA315399_P_NODE_22084_length_289_cov_19.170635_g21641_i0 PRJNA315399 22084 289 19.170635 55.40313515 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 68.6 5.4e-11   NR HEX3549472.1 3047550 g21641 i0 54 1.69204152249135 87 25 75.8 2 238 20 400 485 HEX3549472.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Elarobacter sp.] diamond 489 68.6 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;