RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA315399", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA315399 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29474071 29474071 PRJNA315399_P_NODE_395370_length_162_cov_3.624000_g394922_i0 PRJNA315399 395370 162 3.624 5.87088 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 40.4 0.0412   NR HVB87626.1 2052315 g394922 i0 85.7 0.388888888888889 21 3 38.9 0 95 157 23 43 HVB87626.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 63 40.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31197279 31197279 PRJNA315399_P_NODE_143435_length_189_cov_14.098684_g142987_i0 PRJNA315399 143435 189 14.098684 26.64651276 Bacillati 1783272 Bacteria Bacteria 47 4.65e-4   NR HUY85193.1 2052315 g142987 i0 48.1 3.41269841269841 54 21 74.6 1 22 162 1 54 HUY85193.1 pseudouridine synthase [Candidatus Dormiibacterota bacterium] diamond 645 47.4 0.991561181434599 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32034310 32034310 PRJNA315399_P_NODE_310858_length_178_cov_3.283688_g310410_i0 PRJNA315399 310858 178 3.283688 5.84496464 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 58.2 5.12e-8   NR HXJ73492.1 2052315 g310410 i0 92 2.10674157303371 25 2 42.1 0 3 77 248 272 HXJ73492.1 glycosyltransferase family 9 protein [Candidatus Dormiibacterota bacterium] diamond 375 58.2 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;