contig_metadata
9 rows where bioproject = "PRJNA315399", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2933382 | 2933382 | PRJNA315399_P_NODE_357463_length_167_cov_36.076923_g357015_i0 | PRJNA315399 | 357463 | 167 | 36.076923 | 60.24846141 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|1695542189|gb|CP041186.1| | 2292766 | g357015 | i0 | 96.875 | 0.383233532934132 | 32 | 0 | 19 | 1 | 63 | 94 | 4574589 | 4574559 | Persicimonas caeni strain YN101 chromosome | blastn | 64 | 52.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 15684101 | 15684101 | PRJNA315399_P_NODE_150793_length_189_cov_2.282895_g150345_i0 | PRJNA315399 | 150793 | 189 | 2.282895 | 4.31467155 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 99.4 | 2.08e-22 | NR | WP_163297993.1 | 1765737 | g150345 | i0 | 86.8 | 14.5238095238095 | 53 | 7 | 84.1 | 0 | 188 | 30 | 496 | 548 | WP_163297993.1 response regulator [Dissulfurirhabdus thermomarina] | diamond | 2745 | 99.8 | 0.995991983967936 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Dissulfurirhabdaceae | Dissulfurirhabdus | Dissulfurirhabdus thermomarina | ||||
| 20192682 | 20192682 | PRJNA315399_S_NODE_139856_length_164_cov_1.496063_g139655_i0 | PRJNA315399 | 139856 | 164 | 1.496063 | 2.45354332 | delta/epsilon subdivisions | 68525 | Bacteria | Bacteria | 106 | 1.04e-18 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g139655 | i0 | 80.282 | 43.8536585365854 | 142 | 26 | 86 | 2 | 3 | 143 | 1993073 | 1993213 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 7192 | 106 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 27028627 | 27028627 | PRJNA315399_P_NODE_45122_length_244_cov_4.961353_g44674_i0 | PRJNA315399 | 45122 | 244 | 4.961353 | 12.10570132 | root | 1 | Root_unresolved | Root_unresolved | 80.1 | 2.16e-15 | NR | OQB73568.1 | 1852867 | g44674 | i0 | 81.6 | 1.69672131147541 | 49 | 9 | 60.2 | 0 | 14 | 160 | 334 | 382 | OQB73568.1 MAG: hypothetical protein BWX92_03322 [Deltaproteobacteria bacterium ADurb.Bin135] | diamond | 414 | 80.5 | 0.995031055900621 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium ADurb.Bin135 | ||||||
| 29979643 | 29979643 | PRJNA315399_S_NODE_162811_length_157_cov_9.408333_g162610_i0 | PRJNA315399 | 162811 | 157 | 9.408333 | 14.77108281 | Deltaproteobacteria bacterium ADurb.Bin135 | 1852867 | Bacteria | Bacteria | 69.7 | 3.4e-12 | NR | OQB73565.1 | 1852867 | g162610 | i0 | 68.9 | 0.859872611464968 | 45 | 14 | 86 | 0 | 21 | 155 | 155 | 199 | OQB73565.1 MAG: hypothetical protein BWX92_03319 [Deltaproteobacteria bacterium ADurb.Bin135] | diamond | 135 | 69.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium ADurb.Bin135 | ||||||
| 31798418 | 31798418 | PRJNA315399_P_NODE_275637_length_180_cov_3.349650_g275189_i0 | PRJNA315399 | 275637 | 180 | 3.34965 | 6.02937 | Myxococcota | 2818505 | Bacteria | Bacteria | 53.5 | 2.29e-6 | NR | PKN55803.1 | 2013741 | g275189 | i0 | 92.6 | 1.8 | 27 | 2 | 45 | 0 | 178 | 98 | 267 | 293 | PKN55803.1 MAG: fructose-bisphosphate aldolase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] | diamond | 324 | 53.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 | ||||||
| 32305164 | 32305164 | PRJNA315399_P_NODE_359059_length_167_cov_6.115385_g358611_i0 | PRJNA315399 | 359059 | 167 | 6.115385 | 10.21269295 | Campylobacterota | 29547 | Bacteria | Bacteria | 52.4 | 2.28e-6 | NR | PKN14846.1 | 2013752 | g358611 | i0 | 85.7 | 1.0059880239521 | 28 | 4 | 50.3 | 0 | 89 | 6 | 72 | 99 | PKN14846.1 MAG: DedA family protein [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-24] | diamond | 168 | 52.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-24 | ||||||
| 32382359 | 32382359 | PRJNA315399_P_NODE_428159_length_158_cov_8.173554_g427711_i0 | PRJNA315399 | 428159 | 158 | 8.173554 | 12.91421532 | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_ | 2026735 | Bacteria | Bacteria | 60.8 | 3.32e-10 | NR | PIR23197.1 | 1973974 | g427711 | i0 | 57.1 | 1.06329113924051 | 56 | 13 | 85.4 | 1 | 153 | 19 | 57 | 112 | PIR23197.1 MAG: sulfurtransferase [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16] | diamond | 168 | 60.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16 | ||||||
| 32792283 | 32792283 | PRJNA315399_P_NODE_263000_length_181_cov_2.673611_g262552_i0 | PRJNA315399 | 263000 | 181 | 2.673611 | 4.83923591 | Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 | 1797895 | Bacteria | Bacteria | 63.9 | 3.3e-11 | NR | OGQ81088.1 | 1797895 | g262552 | i0 | 69.4 | 0.812154696132597 | 49 | 15 | 81.2 | 0 | 152 | 6 | 1 | 49 | OGQ81088.1 MAG: conjugal transfer protein TraR [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] | diamond | 147 | 63.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;