RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315399", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4208495 4208495 PRJNA315399_P_NODE_120284_length_194_cov_4.821656_g119836_i0 PRJNA315399 120284 194 4.821656 9.35401264 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 3.6e-4   NTclustered gi|2794960815|ref|XM_067866270.1| 2049356 g119836 i0 97.059 0.175257731958763 34 1 18 0 134 167 4380 4347 Monocercomonoides exilis putative RasGEF domain (MONOS_13558), partial mRNA blastn 34 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
20785730 20785730 PRJNA315399_S_NODE_11777_length_331_cov_5.054422_g11576_i0 PRJNA315399 11777 331 5.054422 16.73013682 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.009   NTclustered gi|2794965781|ref|XM_067863239.1| 2049356 g11576 i0 96.875 0.290030211480363 32 1 10 0 215 246 4105 4136 Monocercomonoides exilis uncharacterized protein (MONOS_10761fu10762), partial mRNA blastn 96 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;