RNAquarium Metadata Server
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contig_metadata

31 rows where bioproject = "PRJNA315314" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380671 380671 PRJNA315314_S_NODE_12541_length_229_cov_61.230000_g12220_i0 PRJNA315314 12541 229 61.23 140.2167 Adineta vaga 104782 Rotifera other_Eukaryota 193 1.15e-44   NTclustered gi|37788192|gb|AY218145.1| 104782 g12220 i0 91.034 59.1703056768559 145 9 62 4 2 144 302 160 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 13550 193 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2931594 2931594 PRJNA315314_S_NODE_3183_length_446_cov_74.541966_g2863_i0 PRJNA315314 3183 446 74.541966 332.45716836 Adineta vaga 104782 Rotifera other_Eukaryota 793 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g2863 i0 98.874 80.3766816143498 444 5 99 0 3 446 4595 4152 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 35848 793 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
6168107 6168107 PRJNA315314_S_NODE_19585_length_186_cov_51.426752_g19264_i0 PRJNA315314 19585 186 51.426752 95.65375872 Metazoa 33208 Rotifera other_Eukaryota 344 2.34e-90   NTclustered gi|37785582|gb|AY210469.1| 96448 g19264 i0 100 103.327956989247 186 0 100 0 1 186 1373 1188 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 19219 344 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7443156 7443156 PRJNA315314_S_NODE_15406_length_208_cov_64.916201_g15085_i0 PRJNA315314 15406 208 64.916201 135.02569808 Metazoa 33208 Rotifera other_Eukaryota 383 5.69e-102   NTclustered gi|37785582|gb|AY210469.1| 96448 g15085 i0 100 98.7451923076923 207 0 99 0 2 208 3151 2945 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 20539 383 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
10584828 10584828 PRJNA315314_S_NODE_3709_length_415_cov_61.489637_g3388_i0 PRJNA315314 3709 415 61.489637 255.18199355 Adineta vaga 104782 Rotifera other_Eukaryota 686 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3388 i0 98.705 4.58313253012048 386 5 93 0 1 386 10013 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1902 686 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13134637 13134637 PRJNA315314_S_NODE_28651_length_158_cov_1.596899_g28330_i0 PRJNA315314 28651 158 1.596899 2.52310042 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 75.9 1.18e-14   NR CAF0892122.1 104777 g28330 i0 72.5 1.93670886075949 51 14 96.8 0 154 2 27 77 CAF0892122.1 unnamed protein product [Brachionus calyciflorus] diamond 306 75.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
13818704 13818704 PRJNA315314_S_NODE_21311_length_179_cov_21.800000_g20990_i0 PRJNA315314 21311 179 21.8 39.022 Eurotatoria 2816136 Rotifera other_Eukaryota 283 4.94e-72   NTclustered gi|57282209|emb|AJ487047.1| 195509 g20990 i0 95.055 101.675977653631 182 5 100 4 1 179 684 864 Floscularia decora 18S rRNA gene blastn 18200 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Flosculariaceae Flosculariidae Floscularia Floscularia decora
15683298 15683298 PRJNA315314_S_NODE_12013_length_234_cov_32.624390_g11692_i0 PRJNA315314 12013 234 32.62439 76.3410726 Adineta vaga 104782 Rotifera other_Eukaryota 411 3e-110   NTclustered gi|72153731|gb|DQ089739.1| 104782 g11692 i0 98.291 27.0384615384615 234 4 100 0 1 234 2390 2623 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 6327 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16367943 16367943 PRJNA315314_S_NODE_533_length_1031_cov_81.878244_g403_i0 PRJNA315314 533 1031 81.878244 844.16469564 Eurotatoria 2816136 Rotifera other_Eukaryota 1749 0   NTclustered gi|72153762|gb|DQ089743.1| 231624 g403 i0 97.3 35.0436469447139 1037 17 99 8 4 1031 2187 1153 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 36130 1764 0.991496598639456 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
22057289 22057289 PRJNA315314_S_NODE_20298_length_183_cov_14.902597_g19977_i0 PRJNA315314 20298 183 14.902597 27.27175251 Adineta vaga 104782 Rotifera other_Eukaryota 101 8.84e-26   NR UJR22359.1 104782 g19977 i0 90.9 1.80327868852459 55 5 90.2 0 2 166 69 123 UJR22359.1 hypothetical protein I4U23_025421 [Adineta vaga] diamond 330 101 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
23332873 23332873 PRJNA315314_S_NODE_23979_length_170_cov_34.212766_g23658_i0 PRJNA315314 23979 170 34.212766 58.1617022 Lecanidae environmental sample 662389 Rotifera other_Eukaryota 257 2.81e-64   NTclustered gi|255760339|gb|GQ371121.1| 662389 g23658 i0 94.611 98.3411764705882 167 8 98 1 1 167 191 26 Lecanidae environmental sample clone Lacanidae2 18S ribosomal RNA gene, partial sequence blastn 16718 257 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae   Lecanidae environmental sample
26838915 26838915 PRJNA315314_S_NODE_16561_length_202_cov_1.052023_g16240_i0 PRJNA315314 16561 202 1.052023 2.12508646 Eurotatoria 2816136 Rotifera other_Eukaryota 145 1.18e-38   NR CAF1631363.1 249248 g16240 i0 100 19.9009900990099 67 0 99.5 0 1 201 1237 1303 CAF1631363.1 unnamed protein product, partial [Adineta ricciae] diamond 4020 145 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27376630 27376630 PRJNA315314_S_NODE_32103_length_151_cov_1.303279_g31782_i0 PRJNA315314 32103 151 1.303279 1.96795129 Eurotatoria 2816136 Rotifera other_Eukaryota 84.3 1.15e-18   NR AAX81535.1 249248 g31782 i0 91.8 4.86754966887417 49 4 97.4 0 3 149 78 126 AAX81535.1 ribosomal protein S7-like protein [Adineta ricciae] diamond 735 84.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27453771 27453771 PRJNA315314_S_NODE_12083_length_234_cov_2.439024_g11762_i0 PRJNA315314 12083 234 2.439024 5.70731616 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 58.2 3.31e-8   NR CAF1129891.1 1234261 g11762 i0 46 1.44871794871795 63 33 79.5 1 3 188 106 168 CAF1129891.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 339 58.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
28323420 28323420 PRJNA315314_S_NODE_24186_length_170_cov_1.957447_g23865_i0 PRJNA315314 24186 170 1.957447 3.3276599 Eurotatoria 2816136 Rotifera other_Eukaryota 99 2.01e-22   NR CAF1617361.1 249248 g23865 i0 98.2 7.78235294117647 55 1 97.1 0 169 5 112 166 CAF1617361.1 unnamed protein product [Adineta ricciae] diamond 1323 99 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
28323423 28323423 PRJNA315314_S_NODE_27466_length_161_cov_1.348485_g27145_i0 PRJNA315314 27466 161 1.348485 2.17106085 Rotaria 231623 Rotifera other_Eukaryota 75.1 4.57e-14   NR CAF1497961.1 392030 g27145 i0 62.3 7.90062111801242 53 20 98.8 0 1 159 117 169 CAF1497961.1 unnamed protein product [Rotaria magnacalcarata] diamond 1272 75.5 0.994701986754967 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29113006 29113006 PRJNA315314_S_NODE_22308_length_176_cov_1.877551_g21987_i0 PRJNA315314 22308 176 1.877551 3.30448976 Rotaria 231623 Rotifera other_Eukaryota 108 1.08e-26   NR CAF1129048.1 2762511 g21987 i0 87.9 5.93181818181818 58 7 98.9 0 3 176 224 281 CAF1129048.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1044 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
29758324 29758324 PRJNA315314_S_NODE_12271_length_232_cov_2.931034_g11950_i0 PRJNA315314 12271 232 2.931034 6.79999888 Rotaria sordida 392033 Rotifera other_Eukaryota 78.6 1.03e-15   NR CAF3696515.1 392033 g11950 i0 55.1 2.94827586206897 69 27 84.1 2 29 223 28 96 CAF3696515.1 unnamed protein product [Rotaria sordida] diamond 684 78.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
29965561 29965561 PRJNA315314_S_NODE_21711_length_178_cov_2.570470_g21390_i0 PRJNA315314 21711 178 2.57047 4.5754366 Rotaria 231623 Rotifera other_Eukaryota 57.4 5.55e-8   NR CAF1442400.1 392030 g21390 i0 47.4 2.88202247191011 57 27 96.1 2 171 1 139 192 CAF1442400.1 unnamed protein product [Rotaria magnacalcarata] diamond 513 57.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
30565436 30565436 PRJNA315314_S_NODE_8673_length_275_cov_2.223577_g8352_i0 PRJNA315314 8673 275 2.223577 6.11483675 Eurotatoria 2816136 Rotifera other_Eukaryota 117 2.16e-28   NR CAF0972910.1 249248 g8352 i0 90.1 9.92727272727273 91 9 99.3 0 274 2 231 321 CAF0972910.1 unnamed protein product [Adineta ricciae] diamond 2730 117 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30642929 30642929 PRJNA315314_S_NODE_9773_length_259_cov_3.730435_g9452_i0 PRJNA315314 9773 259 3.730435 9.66182665 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 60.5 6.95e-9   NR CAF5166224.1 2762511 g9452 i0 37.2 2.71042471042471 78 48 89.2 1 28 258 14 91 CAF5166224.1 unnamed protein product, partial [Rotaria sp. Silwood1] diamond 702 60.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
30895998 30895998 PRJNA315314_S_NODE_7094_length_303_cov_5.562044_g6773_i0 PRJNA315314 7094 303 5.562044 16.85299332 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 73.9 2.87e-13   NR CAF1615689.1 2762511 g6773 i0 42.4 2.73267326732673 92 51 90.1 2 303 31 120 210 CAF1615689.1 unnamed protein product [Rotaria sp. Silwood1] diamond 828 73.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
30927613 30927613 PRJNA315314_S_NODE_27454_length_161_cov_1.393939_g27133_i0 PRJNA315314 27454 161 1.393939 2.24424179 Rotaria sordida 392033 Rotifera other_Eukaryota 58.5 3.22e-8   NR CAF0802631.1 392033 g27133 i0 78.4 0.68944099378882 37 8 68.9 0 11 121 482 518 CAF0802631.1 unnamed protein product [Rotaria sordida] diamond 111 58.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31085422 31085422 PRJNA315314_S_NODE_18375_length_192_cov_4.687117_g18054_i0 PRJNA315314 18375 192 4.687117 8.99926464 Adineta ricciae 249248 Rotifera other_Eukaryota 57.4 1.01e-7   NR CAF0784306.1 249248 g18054 i0 46.8 0.96875 62 31 93.8 2 9 188 100 161 CAF0784306.1 unnamed protein product [Adineta ricciae] diamond 186 57.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31654418 31654418 PRJNA315314_S_NODE_24597_length_169_cov_1.257143_g24276_i0 PRJNA315314 24597 169 1.257143 2.12457167 Adineta ricciae 249248 Rotifera other_Eukaryota 95.5 2.98e-21   NR CAF1162286.1 249248 g24276 i0 89.1 14.5207100591716 55 6 97.6 0 3 167 309 363 CAF1162286.1 unnamed protein product [Adineta ricciae] diamond 2454 95.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31780958 31780958 PRJNA315314_S_NODE_24917_length_168_cov_1.604317_g24596_i0 PRJNA315314 24917 168 1.604317 2.69525256 Adineta ricciae 249248 Rotifera other_Eukaryota 62 2e-9   NR CAF1677623.1 249248 g24596 i0 83.3 1.67857142857143 42 7 75 0 3 128 304 345 CAF1677623.1 unnamed protein product [Adineta ricciae] diamond 282 62 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31925100 31925100 PRJNA315314_S_NODE_20797_length_182_cov_1.202614_g20476_i0 PRJNA315314 20797 182 1.202614 2.18875748 Eurotatoria 2816136 Rotifera other_Eukaryota 92.4 1.21e-22   NR CAF1681633.1 249248 g20476 i0 95.8 3.95604395604396 48 2 79.1 0 3 146 53 100 CAF1681633.1 unnamed protein product, partial [Adineta ricciae] diamond 720 93.2 0.991416309012876 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32002613 32002613 PRJNA315314_S_NODE_25938_length_165_cov_1.507353_g25617_i0 PRJNA315314 25938 165 1.507353 2.48713245 Adineta ricciae 249248 Rotifera other_Eukaryota 45.1 0.00188   NR CAF1187129.1 249248 g25617 i0 54.3 0.836363636363636 46 19 81.8 2 11 145 17 61 CAF1187129.1 unnamed protein product [Adineta ricciae] diamond 138 45.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32413993 32413993 PRJNA315314_S_NODE_19179_length_188_cov_5.232704_g18858_i0 PRJNA315314 19179 188 5.232704 9.83748352 Adineta steineri 433720 Rotifera other_Eukaryota 42.7 0.00622   NR CAF1472279.1 433720 g18858 i0 85.7 0.335106382978723 21 3 33.5 0 125 187 90 110 CAF1472279.1 unnamed protein product [Adineta steineri] diamond 63 42.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32572300 32572300 PRJNA315314_S_NODE_19639_length_186_cov_4.675159_g19318_i0 PRJNA315314 19639 186 4.675159 8.69579574 Rotaria sordida 392033 Rotifera other_Eukaryota 90.5 9.78e-21   NR CAF0733783.1 392033 g19318 i0 59.7 4 62 25 100 0 186 1 106 167 CAF0733783.1 unnamed protein product [Rotaria sordida] diamond 744 90.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32729557 32729557 PRJNA315314_S_NODE_17640_length_196_cov_2.604790_g17319_i0 PRJNA315314 17640 196 2.60479 5.1053884 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 94.7 2.5699999999999998e-23   NR CAF3440507.1 2762512 g17319 i0 72.1 0.933673469387755 61 17 93.4 0 191 9 8 68 CAF3440507.1 unnamed protein product [Rotaria sp. Silwood2] diamond 183 94.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;