RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA315314", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 17 ✖

tax_kingdom 1

  • Metazoa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1065354 1065354 PRJNA315314_S_NODE_27301_length_161_cov_2.674242_g26980_i0 PRJNA315314 27301 161 2.674242 4.30552962 Petrosiidae 68562 Porifera other_Eukaryota 150 4.61e-32   NTclustered gi|512765353|gb|KC869591.1| 595385 g26980 i0 85.256 69.5093167701863 156 12 97 5 6 161 3121 3265 Neopetrosia subtriangularis voucher P10x50 28S ribosomal RNA gene, partial sequence blastn 11191 150 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Petrosiidae Neopetrosia Neopetrosia subtriangularis
2931457 2931457 PRJNA315314_S_NODE_21723_length_178_cov_2.463087_g21402_i0 PRJNA315314 21723 178 2.463087 4.38429486 Oopsacas minuta 111878 Porifera other_Eukaryota 86.3 5.45e-18   NR KAI6646745.1 111878 g21402 i0 69.5 0.99438202247191 59 18 99.4 0 177 1 328 386 KAI6646745.1 Phosphoglycerate kinase 1-like [Oopsacas minuta] diamond 177 86.3 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
2931731 2931731 PRJNA315314_S_NODE_9323_length_265_cov_4.508475_g9002_i0 PRJNA315314 9323 265 4.508475 11.94745875 Opisthokonta 33154 Porifera other_Eukaryota 120 3.78e-30   NR XP_062510034.1 121492 g9002 i0 69.7 6.13584905660377 76 23 86 0 265 38 314 389 XP_062510034.1 S-adenosylmethionine synthase-like [Corticium candelabrum] diamond 1626 120 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
4208328 4208328 PRJNA315314_S_NODE_9264_length_266_cov_3.405063_g8943_i0 PRJNA315314 9264 266 3.405063 9.05746758 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 2e-34   NR XP_065826773.1 121494 g8943 i0 69 8.45864661654135 84 26 94.7 0 13 264 1 84 XP_065826773.1 NHP2-like protein 1 [Oscarella lobularis] diamond 2250 124 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
5484256 5484256 PRJNA315314_S_NODE_19445_length_187_cov_3.341772_g19124_i0 PRJNA315314 19445 187 3.341772 6.24911364 Haliclona cinerea 178541 Porifera other_Eukaryota 78.7 2.64e-10   NTclustered gi|2842131310|emb|OZ194986.1| 178541 g19124 i0 95.833 34.048128342246 48 2 26 0 59 106 2801 2754 Haliclona cinerea genome assembly, organelle: mitochondrion blastn 6367 78.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Chalinidae Haliclona Haliclona cinerea
14409737 14409737 PRJNA315314_S_NODE_23692_length_171_cov_10.992958_g23371_i0 PRJNA315314 23692 171 10.992958 18.79795818 Crateromorpha meyeri 472232 Porifera other_Eukaryota 62.1 2.38e-5   NTclustered gi|190350204|emb|AM886359.1| 472232 g23371 i0 100 0.192982456140351 33 0 19 0 139 171 651 683 Crateromorpha meyeri partial 28S rRNA gene, isolated from Japan blastn 33 62.1 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Rossellidae Crateromorpha Crateromorpha meyeri
14409971 14409971 PRJNA315314_S_NODE_7152_length_302_cov_2.644689_g6831_i0 PRJNA315314 7152 302 2.644689 7.98696078 Metazoa 33208 Porifera other_Eukaryota 135 5.439999999999998e-35   NR XP_064390098.1 6063 g6831 i0 65.7 3.94370860927152 99 32 98.3 1 4 300 241 337 XP_064390098.1 4-aminobutyrate aminotransferase, mitochondrial-like isoform X1 [Halichondria panicea] diamond 1191 135 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
15092975 15092975 PRJNA315314_S_NODE_15912_length_205_cov_10.437500_g15591_i0 PRJNA315314 15912 205 10.4375 21.396875 Demospongiae 6042 Porifera other_Eukaryota 58.4 3.85e-4   NTclustered gi|2719038895|ref|XR_010393624.1| 6063 g15591 i0 100 14.8536585365854 31 0 15 0 175 205 3369 3339 PREDICTED: Halichondria panicea large subunit ribosomal RNA (LOC135332780), rRNA blastn 3045 58.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
15092991 15092991 PRJNA315314_S_NODE_18272_length_193_cov_2.176829_g17951_i0 PRJNA315314 18272 193 2.176829 4.20127997 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 120 2.31e-30   NR AZI95702.1 6063 g17951 i0 87.5 147.233160621762 64 8 99.5 0 2 193 194 257 AZI95702.1 26S proteasome regulatory subunit 6A-B, partial [Halichondria panicea] diamond 28416 120 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
18232611 18232611 PRJNA315314_S_NODE_31515_length_152_cov_1.813008_g31194_i0 PRJNA315314 31515 152 1.813008 2.75577216 Oopsacas minuta 111878 Porifera other_Eukaryota 95.5 1.3100000000000002e-21   NR KAI6654578.1 111878 g31194 i0 81.6 0.967105263157895 49 9 96.7 0 151 5 84 132 KAI6654578.1 Actin-related protein 2-B [Oopsacas minuta] diamond 147 95.5 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
25291500 25291500 PRJNA315314_S_NODE_4620_length_372_cov_29.116618_g4299_i0 PRJNA315314 4620 372 29.116618 108.31381896 Haplosclerida 6049 Porifera other_Eukaryota 128 5.71e-25   NTclustered gi|1284883228|gb|KY825184.1| 178514 g4299 i0 80.337 8.45698924731183 178 28 47 5 198 372 3474 3301 Amphimedon compressa voucher MNRJ:18771 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 3146 128 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon compressa
27579768 27579768 PRJNA315314_S_NODE_12404_length_231_cov_1.900990_g12083_i0 PRJNA315314 12404 231 1.90099 4.3912869 Geodia barretti 519541 Porifera other_Eukaryota 79.7 2.57e-16   NR CAI8035304.1 519541 g12083 i0 51.3 2.94805194805195 76 31 96.1 2 9 230 120 191 CAI8035304.1 hypothetical protein GBAR_LOCUS19830 [Geodia barretti] diamond 681 79.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
27769576 27769576 PRJNA315314_S_NODE_6284_length_322_cov_2.525597_g5963_i0 PRJNA315314 6284 322 2.525597 8.13242234 Geodia barretti 519541 Porifera other_Eukaryota 88.2 2.89e-19   NR CAI8030757.1 519541 g5963 i0 52.8 0.829192546583851 89 36 81.1 2 13 273 91 175 CAI8030757.1 hypothetical protein GBAR_LOCUS17449 [Geodia barretti] diamond 267 88.2 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
27958732 27958732 PRJNA315314_S_NODE_18625_length_191_cov_2.425926_g18304_i0 PRJNA315314 18625 191 2.425926 4.63351866 Geodia barretti 519541 Porifera other_Eukaryota 74.7 9.04e-15   NR CAI8030757.1 519541 g18304 i0 56.7 0.942408376963351 60 25 94.2 1 1 180 118 176 CAI8030757.1 hypothetical protein GBAR_LOCUS17449 [Geodia barretti] diamond 180 74.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
28084961 28084961 PRJNA315314_S_NODE_21765_length_178_cov_1.959732_g21444_i0 PRJNA315314 21765 178 1.959732 3.48832296 Oscarella lobularis 121494 Porifera other_Eukaryota 65.5 1.5e-10   NR XP_065839251.1 121494 g21444 i0 52.5 6.89325842696629 59 28 99.4 0 178 2 636 694 XP_065839251.1 dipeptidyl peptidase 3-like [Oscarella lobularis] diamond 1227 65.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
31229069 31229069 PRJNA315314_S_NODE_18915_length_190_cov_1.409938_g18594_i0 PRJNA315314 18915 190 1.409938 2.6788822 Opisthokonta 33154 Porifera other_Eukaryota 63.9 5.95e-10   NR XP_065909556.1 196820 g18594 i0 47.6 5.00526315789474 63 32 97.9 1 188 3 387 449 XP_065909556.1 leukotriene A-4 hydrolase-like [Dysidea avara] diamond 951 64.3 0.993779160186625 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
32540695 32540695 PRJNA315314_S_NODE_21519_length_179_cov_1.673333_g21198_i0 PRJNA315314 21519 179 1.673333 2.99526607 Amphimedon queenslandica 400682 Porifera other_Eukaryota 47 5.07e-4   NR XP_003387954.2 400682 g21198 i0 50 1.29050279329609 40 20 67 0 2 121 316 355 XP_003387954.2 PREDICTED: pre-rRNA processing protein FTSJ3-like [Amphimedon queenslandica] diamond 231 47 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;