RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA315314", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4208089 4208089 PRJNA315314_S_NODE_27064_length_162_cov_1.541353_g26743_i0 PRJNA315314 27064 162 1.541353 2.49699186 Diadema antillarum 105358 Echinodermata other_Eukaryota 63.9 6.23e-6   NTclustered gi|2919450108|ref|XM_071640649.1| 105358 g26743 i0 93.182 2.08024691358025 44 2 27 1 2 44 638 595 PREDICTED: Diadema antillarum cytoskeleton-associated protein 5-like (LOC139729720), mRNA blastn 337 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
11859382 11859382 PRJNA315314_S_NODE_15150_length_210_cov_3.276243_g14829_i0 PRJNA315314 15150 210 3.276243 6.8801103 Anneissia japonica 1529436 Echinodermata other_Eukaryota 114 2.5e-29   NR XP_033125693.1 1529436 g14829 i0 75.4 1.97142857142857 69 17 98.6 0 3 209 147 215 XP_033125693.1 40S ribosomal protein S4, X isoform-like [Anneissia japonica] diamond 414 114 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
14409841 14409841 PRJNA315314_S_NODE_30652_length_153_cov_22.782258_g30331_i0 PRJNA315314 30652 153 22.782258 34.85685474 Myriotrochus sp. AKM-2016 1902928 Echinodermata other_Eukaryota 183 4.259999999999999e-42   NTclustered gi|1160550711|gb|KX856867.1| 1902928 g30331 i0 88.235 99.9869281045752 153 18 100 0 1 153 563 411 Myriotrochus sp. AKM-2016 voucher NIWA:37812 28S ribosomal RNA gene, partial sequence blastn 15298 183 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Apodida Myriotrochidae Myriotrochus Myriotrochus sp. AKM-2016
27611549 27611549 PRJNA315314_S_NODE_22644_length_175_cov_1.630137_g22323_i0 PRJNA315314 22644 175 1.630137 2.85273975 Patiria miniata 46514 Echinodermata other_Eukaryota 47.4 3.6e-4   NR XP_038062462.1 46514 g22323 i0 66.7 1.02857142857143 30 7 51.4 1 8 97 4740 4766 XP_038062462.1 uncharacterized protein LOC119732952 isoform X1 [Patiria miniata] diamond 180 47.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30945044 30945044 PRJNA315314_S_NODE_23934_length_171_cov_1.514085_g23613_i0 PRJNA315314 23934 171 1.514085 2.58908535 Metazoa 33208 Echinodermata other_Eukaryota 42.4 0.0192   NR XP_038050153.1 46514 g23613 i0 39.6 1.57894736842105 48 29 84.2 0 169 26 205 252 XP_038050153.1 uncharacterized protein LOC119723520 [Patiria miniata] diamond 270 42.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
31274987 31274987 PRJNA315314_S_NODE_14675_length_213_cov_4.853261_g14354_i0 PRJNA315314 14675 213 4.853261 10.33744593 Acanthaster planci 133434 Echinodermata other_Eukaryota 51.6 1.88e-5   NR XP_022093994.1 133434 g14354 i0 60 0.492957746478873 35 14 49.3 0 1 105 291 325 XP_022093994.1 uncharacterized protein LOC110981078 [Acanthaster planci] diamond 105 51.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;