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contig_metadata

7 rows where bioproject = "PRJNA315314", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5484247 5484247 PRJNA315314_S_NODE_1865_length_569_cov_7.668519_g1593_i0 PRJNA315314 1865 569 7.668519 43.63387311 Polymyxa betae 41456 SAR_Eukaryotes SAR_Eukaryotes 202 5.27e-47   NTclustered gi|2127897050|ref|NC_059071.1| 41456 g1593 i0 77.568 52.871704745167 370 60 62 21 4 357 20050 19688 Polymyxa betae isolate A26-41 genome assembly, organelle: mitochondrion blastn 30084 202 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Polymyxa Polymyxa betae
6758487 6758487 PRJNA315314_S_NODE_2186_length_533_cov_4.980159_g1895_i0 PRJNA315314 2186 533 4.980159 26.54424747 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 390 9.760000000000001e-104   NTclustered gi|302026178|gb|GQ377695.1| 862247 g1895 i0 80.952 79.3452157598499 504 86 94 8 28 526 1118 620 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 42291 390 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
26648476 26648476 PRJNA315314_S_NODE_16641_length_201_cov_4.046512_g16320_i0 PRJNA315314 16641 201 4.046512 8.13348912 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 3.43e-28   NR ADK90073.1 862247 g16320 i0 72.7 10.8358208955224 66 18 98.5 0 199 2 180 245 ADK90073.1 elongation factor 1 alpha, partial [Arachnula sp. CL12] diamond 2178 115 0.991304347826087 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
28464054 28464054 PRJNA315314_S_NODE_14446_length_215_cov_2.672043_g14125_i0 PRJNA315314 14446 215 2.672043 5.74489245 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 61.2 6.69e-9   NR CEP03532.1 37360 g14125 i0 73 0.516279069767442 37 10 51.6 0 3 113 287 323 CEP03532.1 hypothetical protein PBRA_009417 [Plasmodiophora brassicae] diamond 111 61.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28905763 28905763 PRJNA315314_S_NODE_24588_length_169_cov_1.314286_g24267_i0 PRJNA315314 24588 169 1.314286 2.22114334 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 110 2.0100000000000003e-27   NR CEP01219.1 37360 g24267 i0 92.7 1.95266272189349 55 4 97.6 0 3 167 195 249 CEP01219.1 hypothetical protein PBRA_001825 [Plasmodiophora brassicae] diamond 330 110 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31559908 31559908 PRJNA315314_S_NODE_31616_length_152_cov_1.260163_g31295_i0 PRJNA315314 31616 152 1.260163 1.91544776 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 67 1.7e-11   NR CEO96095.1 37360 g31295 i0 57.1 0.967105263157895 49 21 96.7 0 152 6 96 144 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 147 67 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32540685 32540685 PRJNA315314_S_NODE_12999_length_226_cov_2.065990_g12678_i0 PRJNA315314 12999 226 2.06599 4.6691374 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 114 1.78e-30   NR CEO99151.1 37360 g12678 i0 72 10.9247787610619 75 21 99.6 0 226 2 18 92 CEO99151.1 hypothetical protein PBRA_001056 [Plasmodiophora brassicae] diamond 2469 114 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;