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contig_metadata

18 rows where bioproject = "PRJNA315314", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA315314 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380807 380807 PRJNA315314_S_NODE_20061_length_184_cov_10.393548_g19740_i0 PRJNA315314 20061 184 10.393548 19.12412832 Urospora ovalis 1852269 SAR_Eukaryotes SAR_Eukaryotes 63.9 7.25e-6   NTclustered gi|2574881051|gb|OR529005.1| 1852269 g19740 i0 95.122 16.4565217391304 41 1 22 1 145 184 476 516 Urospora ovalis isolate WSBS large subunit ribosomal RNA gene, partial sequence blastn 3028 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Urosporidae Urospora Urospora ovalis
1065268 1065268 PRJNA315314_S_NODE_13681_length_220_cov_3512.675393_g13360_i0 PRJNA315314 13681 220 3512.675393 7727.8858646 root 1 Root_unresolved Root_unresolved 71.3 5.38e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g13360 i0 95.556 18.8454545454545 45 0 20 2 176 220 422 380 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4146 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
1655738 1655738 PRJNA315314_S_NODE_3082_length_452_cov_10.947991_g2764_i0 PRJNA315314 3082 452 10.947991 49.48491932 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 59.3 4.51e-7   NR KAI4839932.1 5824 g2764 i0 40.7 1.81194690265487 91 41 60.4 2 452 180 33 110 KAI4839932.1 hypothetical protein MKS88_001284 [Plasmodium brasilianum] diamond 819 59.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
4893224 4893224 PRJNA315314_S_NODE_604_length_970_cov_748.426142_g461_i0 PRJNA315314 604 970 748.426142 7259.7335774 root 1 Root_unresolved Root_unresolved 69.4 9.75e-7   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g461 i0 93.617 4.1 47 1 5 2 1 46 380 425 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3977 69.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
6758519 6758519 PRJNA315314_S_NODE_24126_length_170_cov_2.588652_g23805_i0 PRJNA315314 24126 170 2.588652 4.4007084 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|697889572|ref|XR_696405.1| 869250 g23805 i0 96.97 0.523529411764706 33 0 19 1 1 32 3109 3141 Theileria orientalis strain Shintoku 28S ribosomal RNA rRNA blastn 89 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
15092966 15092966 PRJNA315314_S_NODE_14632_length_213_cov_3667.831522_g14311_i0 PRJNA315314 14632 213 3667.831522 7812.48114186 root 1 Root_unresolved Root_unresolved 71.3 5.17e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g14311 i0 95.455 19.4929577464789 44 2 21 0 170 213 423 380 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4152 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15093053 15093053 PRJNA315314_S_NODE_27692_length_160_cov_2.618321_g27371_i0 PRJNA315314 27692 160 2.618321 4.1893136 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 68.6 9.4e-13   NR XP_013251003.1 5801 g27371 i0 93.8 10.8 32 2 60 0 158 63 130 161 XP_013251003.1 40S ribosomal protein S15A, putative [Eimeria acervulina] diamond 1728 68.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
15683345 15683345 PRJNA315314_S_NODE_14653_length_213_cov_12.532609_g14332_i0 PRJNA315314 14653 213 12.532609 26.69445717 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.03e-4   NTclustered gi|820698945|tpe|LN714498.1| 432359 g14332 i0 85.714 1.91079812206573 56 6 26 2 89 143 2293465 2293519 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 407 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20782284 20782284 PRJNA315314_S_NODE_18617_length_191_cov_2.506173_g18296_i0 PRJNA315314 18617 191 2.506173 4.78679043 Nephromyces sp. ex Molgula occidentalis 2544991 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.82e-5   NTclustered gi|1735073273|gb|MK573204.1| 2544991 g18296 i0 91.111 0.235602094240838 45 3 23 1 85 128 26389 26345 Nephromyces sp. ex Molgula occidentalis isolate 638 apicoplast, partial genome blastn 45 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Nephromyces Nephromyces sp. ex Molgula occidentalis
24607045 24607045 PRJNA315314_S_NODE_30380_length_154_cov_2.184000_g30059_i0 PRJNA315314 30380 154 2.184 3.36336 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.49e-8   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g30059 i0 88.333 16.961038961039 60 6 38 1 91 149 4102 4043 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 2612 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
27137101 27137101 PRJNA315314_S_NODE_16882_length_200_cov_2.807018_g16561_i0 PRJNA315314 16882 200 2.807018 5.614036 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 95.1 6.949999999999999e-23   NR XP_002367420.1 508771 g16561 i0 70 1.74 60 18 90 0 200 21 63 122 XP_002367420.1 translation initiation factor eIF-5A, putative [Toxoplasma gondii ME49] diamond 348 95.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
28576112 28576112 PRJNA315314_S_NODE_30307_length_154_cov_2.912000_g29986_i0 PRJNA315314 30307 154 2.912 4.48448 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.02e-6   NR KAF8822859.1 476202 g29986 i0 68.8 10.6168831168831 32 10 62.3 0 153 58 122 153 KAF8822859.1 ribosomal protein RPS18 [Cardiosporidium cionae] diamond 1635 53.1 0.994350282485876 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29113007 29113007 PRJNA315314_S_NODE_28268_length_159_cov_1.100000_g27947_i0 PRJNA315314 28268 159 1.1 1.749 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 59.7 9.68e-9   NR OEH79184.1 88456 g27947 i0 51 5.71698113207547 51 25 96.2 0 2 154 127 177 OEH79184.1 ribosomal protein [Cyclospora cayetanensis] diamond 909 59.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29316426 29316426 PRJNA315314_S_NODE_25889_length_165_cov_1.808824_g25568_i0 PRJNA315314 25889 165 1.808824 2.9845596 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 74.3 9.45e-14   NR XP_021338005.1 1133968 g25568 i0 63 6.87272727272727 54 20 98.2 0 165 4 182 235 XP_021338005.1 mitochondrial processing peptidase [Babesia microti strain RI] diamond 1134 74.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
30074187 30074187 PRJNA315314_S_NODE_26672_length_163_cov_1.574627_g26351_i0 PRJNA315314 26672 163 1.574627 2.56664201 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 70.9 6.9e-13   NR XP_067802156.1 323732 g26351 i0 61.1 4.96932515337423 54 21 99.4 0 162 1 188 241 XP_067802156.1 bifunctional Ribosomal protein L7A-L8/Ribosomal protein L7Ae-L30e-S12e-Gadd45/Ribosomal protein L7Ae conserved site/Ribosomal protein L7Ae-L8-Nhp2 family/50S ribosomal protein L30e-like [Babesia duncani] diamond 810 70.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
31939170 31939170 PRJNA315314_S_NODE_23637_length_172_cov_1.286713_g23316_i0 PRJNA315314 23637 172 1.286713 2.21314636 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 78.6 3.39e-15   NR OEH74436.1 88456 g23316 i0 61.4 2.98255813953488 57 22 99.4 0 172 2 140 196 OEH74436.1 vacuolar atp synthase subunit a [Cyclospora cayetanensis] diamond 513 78.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32305142 32305142 PRJNA315314_S_NODE_10779_length_247_cov_1.908257_g10458_i0 PRJNA315314 10779 247 1.908257 4.71339479 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 5.58e-26   NR XP_028868039.1 189622 g10458 i0 61 27.9109311740891 82 32 99.6 0 247 2 130 211 XP_028868039.1 40S ribosomal protein S3 [Babesia ovata] diamond 6894 107 0.990654205607477 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
32886767 32886767 PRJNA315314_S_NODE_17300_length_198_cov_1.757396_g16979_i0 PRJNA315314 17300 198 1.757396 3.47964408 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 55.8 1.8e-7   NR XP_011130323.1 110365 g16979 i0 54.4 1.86363636363636 57 26 86.4 0 198 28 48 104 XP_011130323.1 translationally-controlled tumor-like protein [Gregarina niphandrodes] diamond 369 55.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;