RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315314", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29979544 29979544 PRJNA315314_S_NODE_3091_length_452_cov_2.862884_g2773_i0 PRJNA315314 3091 452 2.862884 12.94023568 Fidelibacterota bacterium 2026760 Bacteria Bacteria 70.9 2.73e-11   NR MDZ7796529.1 2026760 g2773 i0 33.1 1.00221238938053 151 90 92.9 4 444 25 17 167 MDZ7796529.1 T9SS type A sorting domain-containing protein [Fidelibacterota bacterium] diamond 453 70.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31559915 31559915 PRJNA315314_S_NODE_576_length_997_cov_5.241736_g438_i0 PRJNA315314 576 997 5.241736 52.26010792 Fidelibacterota bacterium 2026760 Bacteria Bacteria 82.8 1.09e-13   NR MBT6470983.1 2026760 g438 i0 36 0.409227683049147 136 81 40.9 2 992 585 234 363 MBT6470983.1 NUDIX hydrolase [Fidelibacterota bacterium] diamond 408 82.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;