RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315314", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9308717 9308717 PRJNA315314_S_NODE_15188_length_210_cov_2.331492_g14867_i0 PRJNA315314 15188 210 2.331492 4.8961332 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 71.3 5.09e-8   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g14867 i0 84 0.49047619047619 75 10 35 2 1 73 4163050 4163124 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 103 71.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
19506591 19506591 PRJNA315314_S_NODE_10136_length_254_cov_5.764444_g9815_i0 PRJNA315314 10136 254 5.764444 14.64168776 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 121 6.229999999999999e-23   NTclustered gi|2531976020|emb|OY282352.1| 199737 g9815 i0 98.551 31.7913385826772 69 0 27 1 186 254 4497733 4497800 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 8075 121 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;