RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315314", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28495641 28495641 PRJNA315314_S_NODE_15627_length_207_cov_3.601124_g15306_i0 PRJNA315314 15627 207 3.601124 7.45432668 Minisyncoccia bacterium 3120121 Bacteria Bacteria 53.1 2.13e-6   NR MFT7645060.1 3120121 g15306 i0 66.7 0.521739130434783 36 12 52.2 0 69 176 46 81 MFT7645060.1 hypothetical protein [Minisyncoccia bacterium] diamond 108 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium
30168924 30168924 PRJNA315314_S_NODE_25052_length_167_cov_3.956522_g24731_i0 PRJNA315314 25052 167 3.956522 6.60739174 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.3 1.65e-5   NR MCK5084113.1 2053589 g24731 i0 42.9 1.76047904191617 49 28 88 0 11 157 77 125 MCK5084113.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 294 49.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;