RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315314", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27042719 27042719 PRJNA315314_S_NODE_17982_length_194_cov_4.424242_g17661_i0 PRJNA315314 17982 194 4.424242 8.58302948 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 69.7 4.66e-12   NR MDO8336486.1 2026720 g17661 i0 55.7 4.00515463917526 61 25 91.2 1 7 183 255 315 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 777 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28653444 28653444 PRJNA315314_S_NODE_8407_length_279_cov_3.200000_g8086_i0 PRJNA315314 8407 279 3.2 8.928 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 98.2 4.11e-22   NR MDO8336486.1 2026720 g8086 i0 54.9 0.978494623655914 91 39 97.8 1 275 3 169 257 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 273 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;