RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA315314", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27200522 27200522 PRJNA315314_S_NODE_1262_length_680_cov_3.107527_g1029_i0 PRJNA315314 1262 680 3.107527 21.1311836 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 150 2.5e-40   NR NVN97483.1 2052152 g1029 i0 53.2 0.547058823529412 124 58 54.7 0 661 290 161 284 NVN97483.1 O-antigen ligase family protein [Candidatus Nomurabacteria bacterium] diamond 372 150 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32603583 32603583 PRJNA315314_S_NODE_18240_length_193_cov_2.640244_g17919_i0 PRJNA315314 18240 193 2.640244 5.09567092 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 73.9 1.1e-13   NR NVN97483.1 2052152 g17919 i0 53.3 0.932642487046632 60 28 93.3 0 193 14 29 88 NVN97483.1 O-antigen ligase family protein [Candidatus Nomurabacteria bacterium] diamond 180 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;