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contig_metadata

31 rows where bioproject = "PRJNA315314", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 31 ✖

tax_clade 1

  • Amoebozoa · 31 ✖

bioproject 1

  • PRJNA315314 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1655648 1655648 PRJNA315314_S_NODE_24782_length_168_cov_2.856115_g24461_i0 PRJNA315314 24782 168 2.856115 4.7982732 Luapeleamoeba arachisporum 668371 Discosea other_Eukaryota 215 1.7e-51   NTclustered gi|1132350937|gb|KX840325.1| 668371 g24461 i0 90 100.583333333333 170 11 99 4 3 168 2060 1893 Luapeleamoeba arachisporum isolate AMFD 18S ribosomal RNA gene, partial sequence blastn 16898 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Luapeleamoeba Luapeleamoeba arachisporum
1655769 1655769 PRJNA315314_S_NODE_342_length_1265_cov_13.385113_g246_i0 PRJNA315314 342 1265 13.385113 169.32167945 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 636 1.79e-220   NR XP_004337289.1 1257118 g246 i0 72.7 1.98260869565217 417 114 98.9 0 1265 15 423 839 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 2508 636 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2340651 2340651 PRJNA315314_S_NODE_8122_length_283_cov_54.673228_g7801_i0 PRJNA315314 8122 283 54.673228 154.72523524 Vannella 95228 Discosea other_Eukaryota 448 2.8499999999999996e-121   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g7801 i0 97.004 87.0353356890459 267 7 94 1 17 283 118 383 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 24631 448 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
4207964 4207964 PRJNA315314_S_NODE_18764_length_190_cov_5.198758_g18443_i0 PRJNA315314 18764 190 5.198758 9.8776402 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 1.05e-16   NR XP_004337223.1 1257118 g18443 i0 79.5 0.694736842105263 44 9 69.5 0 132 1 72 115 XP_004337223.1 nucleoside diphosphate kinase 1, putative [Acanthamoeba castellanii str. Neff] diamond 132 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4208139 4208139 PRJNA315314_S_NODE_30644_length_153_cov_50.653226_g30323_i0 PRJNA315314 30644 153 50.653226 77.49943578 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 274 2.4599999999999997e-69   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g30323 i0 99.338 58.9934640522876 151 1 99 0 2 152 281 431 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 9026 274 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
4208183 4208183 PRJNA315314_S_NODE_3664_length_417_cov_34.927835_g3344_i0 PRJNA315314 3664 417 34.927835 145.64907195 Cochliopodium sp. strain Kiel 313998 Discosea other_Eukaryota 462 1.56e-125   NTclustered gi|59876024|gb|AY785057.1| 313998 g3344 i0 88.947 66.6115107913669 380 35 90 5 41 417 335 710 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 27777 462 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
5484178 5484178 PRJNA315314_S_NODE_14665_length_213_cov_5.880435_g14344_i0 PRJNA315314 14665 213 5.880435 12.52532655 Paradermamoeba valamo 2792692 Discosea other_Eukaryota 182 2.29e-41   NTclustered gi|1937206108|gb|MW293873.1| 2792692 g14344 i0 82.883 37.8732394366197 222 19 100 9 1 213 109 320 Paradermamoeba valamo strain MSK1 small subunit ribosomal RNA gene, partial sequence blastn 8067 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Paradermamoeba Paradermamoeba valamo
6758429 6758429 PRJNA315314_S_NODE_18146_length_193_cov_17.237805_g17825_i0 PRJNA315314 18146 193 17.237805 33.26896365 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 279 7.01e-71   NTclustered gi|330902858|gb|JF298255.1| 1017091 g17825 i0 95 48.9585492227979 180 6 93 3 10 188 989 1166 Cochliopodium larifeili clone 904 18S ribosomal RNA gene, partial sequence blastn 9449 279 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
8034345 8034345 PRJNA315314_S_NODE_8227_length_281_cov_27.015873_g7906_i0 PRJNA315314 8227 281 27.015873 75.91460313 Cochliopodium minus 313997 Discosea other_Eukaryota 283 8.439999999999999e-72   NTclustered gi|330902862|gb|JF298257.1| 313997 g7906 i0 90.783 8.02135231316726 217 13 77 4 1 215 263 52 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2254 283 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
10584770 10584770 PRJNA315314_S_NODE_29009_length_157_cov_2.312500_g28688_i0 PRJNA315314 29009 157 2.3125 3.630625 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 106 9.8e-19   NTclustered gi|2386968834|ref|NC_068853.1| 343530 g28688 i0 86.458 12.4585987261146 96 13 61 0 1 96 47716 47811 Thecamoeba quadrilineata mitochondrion, complete genome blastn 1956 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
10584808 10584808 PRJNA315314_S_NODE_32009_length_151_cov_1.745902_g31688_i0 PRJNA315314 32009 151 1.745902 2.63631202 Korotnevella heteracantha 1825508 Discosea other_Eukaryota 274 2.42e-69   NTclustered gi|1047608800|gb|KU681496.1| 1825508 g31688 i0 99.338 91.3112582781457 151 1 100 0 1 151 243 93 Korotnevella heteracantha clone 157.1_66.9 18S ribosomal RNA gene, complete sequence blastn 13788 274 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella heteracantha
11859718 11859718 PRJNA315314_S_NODE_6630_length_313_cov_27.904930_g6309_i0 PRJNA315314 6630 313 27.90493 87.3424309 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 420 6.97e-113   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g6309 i0 91.167 60.2492012779553 317 17 98 10 5 312 737 1051 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 18858 420 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
14409550 14409550 PRJNA315314_S_NODE_1292_length_672_cov_17.049767_g1057_i0 PRJNA315314 1292 672 17.049767 114.57443424 Stenamoeba dejonckheerei 2730938 Discosea other_Eukaryota 178 1.06e-39   NTclustered gi|1835259542|gb|MT386405.1| 2730938 g1057 i0 80.738 18.8526785714286 244 34 36 9 1 242 1911 1679 Stenamoeba dejonckheerei strain 32 small subunit ribosomal RNA gene, partial sequence blastn 12669 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba dejonckheerei
14409825 14409825 PRJNA315314_S_NODE_2912_length_463_cov_38.057604_g2595_i0 PRJNA315314 2912 463 38.057604 176.20670652 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 291 8.75e-74   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g2595 i0 86.081 52.2742980561555 273 34 58 3 194 463 291 562 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 24203 291 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
14410012 14410012 PRJNA315314_S_NODE_9232_length_266_cov_28.198312_g8911_i0 PRJNA315314 9232 266 28.198312 75.00750992 Dermamoeba sp. YMesentsev-2023a 3080295 Discosea other_Eukaryota 291 4.74e-74   NTclustered gi|2592161609|gb|OR671173.1| 3080295 g8911 i0 86.891 59.9699248120301 267 26 100 5 1 266 146 404 Dermamoeba sp. YMesentsev-2023a strain Da161 small subunit ribosomal RNA gene, partial sequence blastn 15952 291 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Dermamoeba Dermamoeba sp. YMesentsev-2023a
18916789 18916789 PRJNA315314_S_NODE_29215_length_156_cov_23.645669_g28894_i0 PRJNA315314 29215 156 23.645669 36.88724364 Mayorella 242540 Discosea other_Eukaryota 255 9.12e-64   NTclustered gi|33946336|gb|AY294143.1| 242541 g28894 i0 97.333 98.1089743589744 150 4 96 0 3 152 484 633 Mayorella sp. JJP-2003 small subunit ribosomal RNA gene, partial sequence blastn 15305 255 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
19506671 19506671 PRJNA315314_S_NODE_14936_length_211_cov_12.340659_g14615_i0 PRJNA315314 14936 211 12.340659 26.03879049 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 331 2.13e-86   NTclustered gi|330902855|gb|JF298253.1| 1017091 g14615 i0 97.906 80.0758293838863 191 4 91 0 6 196 1372 1182 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 16896 331 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
19506757 19506757 PRJNA315314_S_NODE_19456_length_187_cov_3.113924_g19135_i0 PRJNA315314 19456 187 3.113924 5.82303788 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 2.6e-20   NTclustered gi|470459156|ref|XM_004341277.1| 1257118 g19135 i0 92.308 15.903743315508 78 6 42 0 11 88 1166 1089 Acanthamoeba castellanii str. Neff ribosomal protein L3, putative (ACA1_264110), partial mRNA blastn 2974 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19506983 19506983 PRJNA315314_S_NODE_4596_length_373_cov_28.465116_g4275_i0 PRJNA315314 4596 373 28.465116 106.17488268 Dermamoeba sp. YMesentsev-2023a 3080295 Discosea other_Eukaryota 243 1.9600000000000002e-59   NTclustered gi|2592161609|gb|OR671173.1| 3080295 g4275 i0 88.67 32.5790884718499 203 18 54 5 173 373 1817 2016 Dermamoeba sp. YMesentsev-2023a strain Da161 small subunit ribosomal RNA gene, partial sequence blastn 12152 243 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Dermamoeba Dermamoeba sp. YMesentsev-2023a
19506990 19506990 PRJNA315314_S_NODE_4876_length_363_cov_28.290419_g4555_i0 PRJNA315314 4876 363 28.290419 102.69422097 Cochliopodium minus 313997 Discosea other_Eukaryota 464 3.7299999999999996e-126   NTclustered gi|330902862|gb|JF298257.1| 313997 g4555 i0 93.103 56.3994490358127 319 16 86 5 1 313 1303 985 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 20473 464 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
20782563 20782563 PRJNA315314_S_NODE_6197_length_324_cov_30.505085_g5876_i0 PRJNA315314 6197 324 30.505085 98.8364754 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 431 3.35e-116   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g5876 i0 92.038 35.2901234567901 314 14 95 9 17 324 4 312 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 11434 431 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
20782633 20782633 PRJNA315314_S_NODE_9377_length_264_cov_16.038298_g9056_i0 PRJNA315314 9377 264 16.038298 42.34110672 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 375 1.26e-99   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g9056 i0 94 42.9886363636364 250 11 93 3 19 264 1792 1543 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 11349 375 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
22742184 22742184 PRJNA315314_S_NODE_3698_length_416_cov_6.793282_g3377_i0 PRJNA315314 3698 416 6.793282 28.26005312 root 1 Root_unresolved Root_unresolved 62.1 6.65e-5   NTclustered gi|909719646|gb|KT185626.1| 5755 g3377 i0 100 2.51682692307692 33 0 8 0 384 416 4034 4002 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1047 62.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28102409 28102409 PRJNA315314_S_NODE_16645_length_201_cov_3.953488_g16324_i0 PRJNA315314 16645 201 3.953488 7.94651088 root 1 Root_unresolved Root_unresolved 49.3 1.53e-5   NR XP_004351526.1 1257118 g16324 i0 53.1 2.29850746268657 49 21 71.6 2 195 52 26 73 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 462 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28653423 28653423 PRJNA315314_S_NODE_20747_length_182_cov_1.771242_g20426_i0 PRJNA315314 20747 182 1.771242 3.22366044 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.1 2.36e-12   NR XP_004347761.1 1257118 g20426 i0 54.2 0.791208791208791 48 22 79.1 0 36 179 176 223 XP_004347761.1 iodothyronine deiodinase [Acanthamoeba castellanii str. Neff] diamond 144 70.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29190264 29190264 PRJNA315314_S_NODE_22969_length_174_cov_1.579310_g22648_i0 PRJNA315314 22969 174 1.57931 2.7479994 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79 2.6e-15   NR XP_004341555.1 1257118 g22648 i0 69 1 58 18 100 0 174 1 39 96 XP_004341555.1 coatomer subunit gamma, putative [Acanthamoeba castellanii str. Neff] diamond 174 79 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29442498 29442498 PRJNA315314_S_NODE_27050_length_162_cov_1.661654_g26729_i0 PRJNA315314 27050 162 1.661654 2.69187948 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 5.33e-12   NR XP_004358299.1 1257118 g26729 i0 55.8 0.962962962962963 52 23 96.3 0 162 7 175 226 XP_004358299.1 signal recognition particle 68 kDa protein [Acanthamoeba castellanii str. Neff] diamond 156 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32509123 32509123 PRJNA315314_S_NODE_28539_length_158_cov_2.271318_g28218_i0 PRJNA315314 28539 158 2.271318 3.58868244 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 9.87e-13   NR XP_004337914.1 1257118 g28218 i0 59.6 0.987341772151899 52 21 98.7 0 157 2 238 289 XP_004337914.1 COP9 signalosome complex subunit 3 (Signalosome subunit 3), putative [Acanthamoeba castellanii str. Neff] diamond 156 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32572320 32572320 PRJNA315314_S_NODE_30819_length_153_cov_2.846774_g30498_i0 PRJNA315314 30819 153 2.846774 4.35556422 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 49.3 5.42e-5   NR XP_004342569.1 1257118 g30498 i0 40.8 0.96078431372549 49 29 96.1 0 1 147 219 267 XP_004342569.1 fatty acid desaturase subfamily protein [Acanthamoeba castellanii str. Neff] diamond 147 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32603592 32603592 PRJNA315314_S_NODE_23000_length_174_cov_1.268966_g22679_i0 PRJNA315314 23000 174 1.268966 2.20800084 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 5.39e-12   NR XP_004340695.1 1257118 g22679 i0 54.9 0.879310344827586 51 23 87.9 0 153 1 69 119 XP_004340695.1 uncharacterized protein ACA1_392980 [Acanthamoeba castellanii str. Neff] diamond 153 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32792249 32792249 PRJNA315314_S_NODE_30900_length_153_cov_2.225806_g30579_i0 PRJNA315314 30900 153 2.225806 3.40548318 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.7 3.28e-12   NR XP_004333431.1 1257118 g30579 i0 56.3 0.941176470588235 48 21 94.1 0 6 149 656 703 XP_004333431.1 cytochrome b5 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 144 69.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;