RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA314497" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA314497 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2931242 2931242 PRJNA314497_S_NODE_1203_length_207_cov_3.174157_g1180_i0 PRJNA314497 1203 207 3.174157 6.57050499 Pseudomonas phage SC_8_H2H8_2017 2723240 Viruses Viruses 106 1.37e-18   NTclustered gi|1829641615|gb|MT121966.1| 2723240 g1180 i0 92 1.9951690821256 75 6 36 0 131 205 9895 9821 Pseudomonas phage SC_8_H2H8_2017 translation initiation factor IF-3, replication protein P, integrase, terminase, terminase A, capsid family protein, tail protein, and minor tail protein L genes, complete cds blastn 413 106 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Pseudomonas phage SC_8_H2H8_2017
6168027 6168027 PRJNA314497_P_NODE_5065_length_152_cov_2.861789_g4913_i0 PRJNA314497 5065 152 2.861789 4.34991928 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g4913 i0 100 100 152 0 100 0 1 152 14445 14294 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15200 281 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7443107 7443107 PRJNA314497_P_NODE_4826_length_161_cov_10.500000_g4674_i0 PRJNA314497 4826 161 10.5 16.905 root 1 Root_unresolved Root_unresolved 298 1.56e-76   NTclustered gi|2079660852|emb|OU501478.1| 10515 g4674 i0 100 100 161 0 100 0 1 161 17839 17999 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 16100 298 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15683252 15683252 PRJNA314497_S_NODE_1273_length_200_cov_3.497076_g1250_i0 PRJNA314497 1273 200 3.497076 6.994152 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 259 9.54e-65   NTclustered gi|2512878152|emb|OX637979.1| 3048757 g1250 i0 90 1 200 20 100 0 1 200 1116 1315 Malassezia restricta associated totivirus 1 polyprotein gene for polyprotein blastn 200 259 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1
20782116 20782116 PRJNA314497_S_NODE_1137_length_214_cov_3.697297_g1114_i0 PRJNA314497 1137 214 3.697297 7.91221558 Staphylococcus phage vB_SsapH-Golestan101-M 2741341 Viruses Viruses 350 5.97e-92   NTclustered gi|1862194296|dbj|LC557520.1| 2741341 g1114 i0 96.667 51.7523364485981 210 7 98 0 5 214 1464 1255 Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome blastn 11075 350 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Baoshanvirus Staphylococcus phage vB_SsapH-Golestan101-M
24017053 24017053 PRJNA314497_P_NODE_4359_length_184_cov_2.974194_g4207_i0 PRJNA314497 4359 184 2.974194 5.47251696 root 1 Root_unresolved Root_unresolved 340 2.99e-89   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g4207 i0 100 100 184 0 100 0 1 184 14457 14640 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18400 340 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25291334 25291334 PRJNA314497_P_NODE_4520_length_175_cov_10.136986_g4368_i0 PRJNA314497 4520 175 10.136986 17.7397255 root 1 Root_unresolved Root_unresolved 324 2.83e-84   NTclustered gi|56160492|ref|AC_000007.1| 10515 g4368 i0 100 100 175 0 100 0 1 175 11989 11815 Human adenovirus 2, complete genome blastn 17500 324 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
29537383 29537383 PRJNA314497_S_NODE_1770_length_165_cov_2.588235_g1747_i0 PRJNA314497 1770 165 2.588235 4.27058775 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 105 1.43e-24   NR CAI9858976.1 3048757 g1747 i0 98.2 1 55 1 100 0 165 1 555 609 CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] diamond 165 105 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1
29916523 29916523 PRJNA314497_P_NODE_3111_length_290_cov_1.854406_g2959_i0 PRJNA314497 3111 290 1.854406 5.3777774 Caudoviricetes sp. 2832643 Viruses Viruses 47.8 9.46e-4   NR DAV81998.1 2832643 g2959 i0 35.6 0.755172413793103 73 46 74.5 1 282 67 15 87 DAV81998.1 MAG TPA: anaerobic ribonucleoside triphosphate reductase [Caudoviricetes sp.] diamond 219 47.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;