RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA312899" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312899 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18231348 18231348 PRJNA312899_P_NODE_48735_length_250_cov_4.059701_g48293_i0 PRJNA312899 48735 250 4.059701 10.1492525 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 270 5.74e-68   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g48293 i0 88.739 166.804 222 24 89 1 1 222 5032256 5032476 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 41701 270 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24604968 24604968 PRJNA312899_P_NODE_11020_length_569_cov_50.351923_g10604_i0 PRJNA312899 11020 569 50.351923 286.50244187 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 245 1.2799999999999998e-73   NR HMD03180.1 2952909 g10604 i0 56.7 2.95782073813708 187 81 98.6 0 565 5 130 316 HMD03180.1 prolyl oligopeptidase family serine peptidase [Candidatus Baltobacteraceae bacterium] diamond 1683 245 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
27674745 27674745 PRJNA312899_P_NODE_20464_length_416_cov_3.452316_g20023_i0 PRJNA312899 20464 416 3.452316 14.36163456 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 45.8 0.0199   NR HEY2473809.1 2952917 g20023 i0 31.3 0.483173076923077 67 46 48.3 0 242 42 574 640 HEY2473809.1 AAA family ATPase [Candidatus Cybelea sp.] diamond 201 45.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
28765496 28765496 PRJNA312899_P_NODE_65907_length_203_cov_2.636364_g65465_i0 PRJNA312899 65907 203 2.636364 5.35181892 Bacteria 2 Bacteria Bacteria 119 9.65e-30   NR HTA59326.1 2952909 g65465 i0 86.6 6.79802955665025 67 9 99 0 203 3 187 253 HTA59326.1 amidase [Candidatus Baltobacteraceae bacterium] diamond 1380 119 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
29127197 29127197 PRJNA312899_P_NODE_2429_length_1055_cov_10.743539_g2221_i0 PRJNA312899 2429 1055 10.743539 113.34433645 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 364 2.49e-120   NR HEY0613115.1 3047550 g2221 i0 49.6 3.88151658767773 343 163 97.5 4 9 1037 94 426 HEY0613115.1 NAD(P)-binding domain-containing protein [Candidatus Elarobacter sp.] diamond 4095 364 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.
31022223 31022223 PRJNA312899_P_NODE_92855_length_165_cov_0.879310_g92413_i0 PRJNA312899 92855 165 0.87931 1.4508615 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 87 3.13e-18   NR MFA5503778.1 3107663 g92413 i0 74.1 1.96363636363636 54 14 98.2 0 164 3 818 871 MFA5503778.1 hypothetical protein [Vulcanimicrobiota bacterium] diamond 324 87 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31401694 31401694 PRJNA312899_P_NODE_25176_length_372_cov_17.820433_g24734_i0 PRJNA312899 25176 372 17.820433 66.29201076 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 72 3.24e-12   NR HTA29551.1 2952917 g24734 i0 31.6 1.25 155 72 100 4 1 372 69 220 HTA29551.1 hypothetical protein [Candidatus Cybelea sp.] diamond 465 72 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
31401705 31401705 PRJNA312899_P_NODE_46336_length_258_cov_3.894737_g45894_i0 PRJNA312899 46336 258 3.894737 10.04842146 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 149 3.289999999999999e-42   NR WP_317994959.1 3016050 g45894 i0 77.9 1.97674418604651 86 19 100 0 1 258 87 172 WP_317994959.1 haloalkane dehalogenase [Vulcanimicrobium alpinum] diamond 510 149 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;