RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312899", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312899 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29270595 29270595 PRJNA312899_P_NODE_85909_length_167_cov_0.864407_g85467_i0 PRJNA312899 85909 167 0.864407 1.44355969 root 1 Root_unresolved Root_unresolved 41.6 0.0262   NR WP_252901390.1 1295370 g85467 i0 76.2 16.4730538922156 21 5 37.7 0 45 107 113 133 WP_252901390.1 M1 family aminopeptidase [Vulcanisaeta sp. JCM 14467] diamond 2751 42 0.990476190476191 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta sp. JCM 14467
29948016 29948016 PRJNA312899_P_NODE_94811_length_164_cov_0.886957_g94369_i0 PRJNA312899 94811 164 0.886957 1.45460948 Thermoproteota archaeon 2056631 Archaea Archaea 63.2 7.92e-10   NR RLG43968.1 2056631 g94369 i0 68.5 1.97560975609756 54 17 98.8 0 3 164 286 339 RLG43968.1 MAG: helicase, partial [Thermoproteota archaeon] diamond 324 63.2 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;