contig_metadata
10 rows where bioproject = "PRJNA312899" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20780794 | 20780794 | PRJNA312899_P_NODE_27017_length_358_cov_10.488673_g26575_i0 | PRJNA312899 | 27017 | 358 | 10.488673 | 37.54944934 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 595 | 1.2499999999999995e-165 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g26575 | i0 | 96.648 | 197.756983240223 | 358 | 12 | 100 | 0 | 1 | 358 | 487 | 844 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 70797 | 595 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 27042684 | 27042684 | PRJNA312899_P_NODE_55082_length_231_cov_3.230769_g54640_i0 | PRJNA312899 | 55082 | 231 | 3.230769 | 7.46307639 | Chlamydia psittaci 84-8471/1 | 1112230 | Bacteria | Bacteria | 41.6 | 0.00841 | NR | EPP32728.1 | 1112230 | g54640 | i0 | 42.4 | 0.766233766233766 | 59 | 20 | 76.6 | 1 | 194 | 18 | 4 | 48 | EPP32728.1 hypothetical protein CP8484711_2621 [Chlamydia psittaci 84-8471/1] | diamond | 177 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 27706490 | 27706490 | PRJNA312899_P_NODE_29924_length_337_cov_17.274306_g29482_i0 | PRJNA312899 | 29924 | 337 | 17.274306 | 58.21441122 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 112 | 1.12e-27 | NR | MCH9611059.1 | 2047757 | g29482 | i0 | 42.3 | 0.98813056379822 | 111 | 64 | 98.8 | 0 | 333 | 1 | 119 | 229 | MCH9611059.1 hypothetical protein [Chlamydiales bacterium] | diamond | 333 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27800947 | 27800947 | PRJNA312899_P_NODE_1744_length_1187_cov_133.944640_g1580_i0 | PRJNA312899 | 1744 | 1187 | 133.94464 | 1589.9228768 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 222 | 2.02e-66 | NR | NBO25047.1 | 2081524 | g1580 | i0 | 81.1 | 0.333614153327717 | 132 | 25 | 33.4 | 0 | 655 | 260 | 1 | 132 | NBO25047.1 IS5 family transposase [Chlamydiota bacterium] | diamond | 396 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 27800970 | 27800970 | PRJNA312899_P_NODE_57124_length_225_cov_7.602273_g56682_i0 | PRJNA312899 | 57124 | 225 | 7.602273 | 17.10511425 | Candidatus Protochlamydia phocaeensis | 1414722 | Bacteria | Bacteria | 62.8 | 1.47e-9 | NR | WP_068468522.1 | 1414722 | g56682 | i0 | 43.2 | 0.986666666666667 | 74 | 42 | 98.7 | 0 | 3 | 224 | 46 | 119 | WP_068468522.1 hypothetical protein [Candidatus Protochlamydia phocaeensis] | diamond | 222 | 62.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia phocaeensis | |
| 29965547 | 29965547 | PRJNA312899_P_NODE_16951_length_458_cov_24.063570_g16512_i0 | PRJNA312899 | 16951 | 458 | 24.06357 | 110.2111506 | Bacteria | 2 | Bacteria | Bacteria | 70.5 | 1.56e-11 | NR | MEI8125813.1 | 2052176 | g16512 | i0 | 44.3 | 0.91703056768559 | 70 | 39 | 45.9 | 0 | 446 | 237 | 127 | 196 | MEI8125813.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 420 | 70.9 | 0.994358251057828 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 31085372 | 31085372 | PRJNA312899_P_NODE_35735_length_303_cov_2.811024_g35293_i0 | PRJNA312899 | 35735 | 303 | 2.811024 | 8.51740272 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 132 | 2.62e-34 | NR | MBA3722990.1 | 2052176 | g35293 | i0 | 62.6 | 3.92079207920792 | 99 | 37 | 98 | 0 | 301 | 5 | 60 | 158 | MBA3722990.1 MCE family protein [Parachlamydiaceae bacterium] | diamond | 1188 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 31686077 | 31686077 | PRJNA312899_P_NODE_95517_length_164_cov_0.886957_g95075_i0 | PRJNA312899 | 95517 | 164 | 0.886957 | 1.45460948 | Chlamydia psittaci | 83554 | Bacteria | Bacteria | 47 | 2.15e-5 | NR | EPP28211.1 | 1112246 | g95075 | i0 | 50.9 | 0.969512195121951 | 53 | 12 | 97 | 1 | 5 | 163 | 1 | 39 | EPP28211.1 hypothetical protein CP082626L3_1479, partial [Chlamydia psittaci 08-2626_L3] | diamond | 159 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci | |
| 32192445 | 32192445 | PRJNA312899_P_NODE_38718_length_288_cov_2.987448_g38276_i0 | PRJNA312899 | 38718 | 288 | 2.987448 | 8.60385024 | Candidatus Acheromyda pituitae | 3076874 | Bacteria | Bacteria | 89.7 | 1.75e-18 | NR | MBX3719258.1 | 3076874 | g38276 | i0 | 93.8 | 0.5 | 48 | 3 | 50 | 0 | 145 | 288 | 1 | 48 | MBX3719258.1 magnesium transporter [Candidatus Acheromyda pituitae] | diamond | 144 | 89.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Acheromyda | Candidatus Acheromyda pituitae | |
| 32572249 | 32572249 | PRJNA312899_P_NODE_36999_length_297_cov_0.931452_g36557_i0 | PRJNA312899 | 36999 | 297 | 0.931452 | 2.76641244 | Chlamydia psittaci | 83554 | Bacteria | Bacteria | 91.7 | 2.7e-22 | NR | EPP28643.1 | 1112246 | g36557 | i0 | 97.6 | 0.424242424242424 | 42 | 1 | 42.4 | 0 | 295 | 170 | 5 | 46 | EPP28643.1 hypothetical protein CP082626L3_1561, partial [Chlamydia psittaci 08-2626_L3] | diamond | 126 | 91.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia psittaci |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;