RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA312899" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26599156 26599156 PRJNA312899_P_NODE_40061_length_282_cov_5.128755_g39619_i0 PRJNA312899 40061 282 5.128755 14.4630891 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 90.5 4.12e-20   NR MBI3305748.1 2052152 g39619 i0 56.2 0.776595744680851 73 32 77.7 0 11 229 137 209 MBI3305748.1 methyltransferase domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 219 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27200498 27200498 PRJNA312899_P_NODE_59302_length_220_cov_1.181287_g58860_i0 PRJNA312899 59302 220 1.181287 2.5988314 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 53.1 2.92e-7   NR USN88392.1 2052152 g58860 i0 62.5 0.654545454545455 48 18 65.5 0 77 220 1 48 USN88392.1 MAG: hypothetical protein H6780_02745 [Candidatus Nomurabacteria bacterium] diamond 144 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
29523384 29523384 PRJNA312899_P_NODE_74630_length_186_cov_2.080292_g74188_i0 PRJNA312899 74630 186 2.080292 3.86934312 Bacteria 2 Bacteria Bacteria 45.1 0.00257   NR USN96601.1 2052152 g74188 i0 77.8 1.30645161290323 27 6 43.5 0 86 6 1 27 USN96601.1 MAG: glycosyltransferase family 2 protein [Candidatus Nomurabacteria bacterium] diamond 243 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32634739 32634739 PRJNA312899_P_NODE_39140_length_286_cov_5.358650_g38698_i0 PRJNA312899 39140 286 5.35865 15.325739 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 191 8.93e-59   NR MCB9819720.1 2052152 g38698 i0 93.7 1.99300699300699 95 6 99.7 0 1 285 91 185 MCB9819720.1 exodeoxyribonuclease III [Candidatus Nomurabacteria bacterium] diamond 570 191 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;