RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312899" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312899 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11857685 11857685 PRJNA312899_P_NODE_16070_length_470_cov_57.099762_g15632_i0 PRJNA312899 16070 470 57.099762 268.3688814 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 164 2.0599999999999995e-47   NR HVK58178.1 2447898 g15632 i0 70.5 0.823404255319149 129 23 78.5 3 2 370 137 256 HVK58178.1 tetratricopeptide repeat protein [Candidatus Kapaibacterium sp.] diamond 387 164 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30042657 30042657 PRJNA312899_P_NODE_32631_length_320_cov_8.918819_g32189_i0 PRJNA312899 32631 320 8.918819 28.5402208 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 95.1 2.4e-22   NR MBU3678228.1 2447898 g32189 i0 55.7 0.825 88 35 80.6 2 39 296 43 128 MBU3678228.1 Rieske (2Fe-2S) protein [Candidatus Kapaibacterium sp.] diamond 264 95.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;