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contig_metadata

16 rows where bioproject = "PRJNA312899", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 16 ✖

tax_kingdom 1

  • Metazoa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1065152 1065152 PRJNA312899_P_NODE_92021_length_165_cov_0.879310_g91579_i0 PRJNA312899 92021 165 0.87931 1.4508615 root 1 Root_unresolved Root_unresolved 300 4.46e-77   NTclustered gi|18147017|dbj|AB047764.1| 6306 g91579 i0 99.394 30.0787878787879 165 1 100 0 1 165 1297 1133 Meloidogyne incognita DNA, polymorphic marker for virulence, isolate:MIGD-VI blastn 4963 300 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne incognita
9307144 9307144 PRJNA312899_P_NODE_18868_length_434_cov_53.031169_g18427_i0 PRJNA312899 18868 434 53.031169 230.15527346 Oigolaimella attenuata 669116 Nematoda Nematoda 309 2.25e-79   NTclustered gi|256709322|gb|GQ422336.1| 669116 g18427 i0 83.483 45.3732718894009 333 53 76 2 87 418 373 42 Oigolaimella attenuata large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 19692 309 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Oigolaimella Oigolaimella attenuata
22055733 22055733 PRJNA312899_P_NODE_24198_length_381_cov_6.430723_g23756_i0 PRJNA312899 24198 381 6.430723 24.50105463 Ancylostoma caninum 29170 Nematoda Nematoda 178 7.99e-50   NR RCN44245.1 29170 g23756 i0 72.2 12.8267716535433 126 33 99.2 1 3 380 522 645 RCN44245.1 putative antigen peptide transporter-like 2 [Ancylostoma caninum] diamond 4887 178 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
22056051 22056051 PRJNA312899_P_NODE_42678_length_271_cov_10.099099_g42236_i0 PRJNA312899 42678 271 10.099099 27.36855829 Longidorus macrosoma 188093 Nematoda Nematoda 401 2.1399999999999994e-107   NTclustered gi|49339465|gb|AY580055.1| 188093 g42236 i0 93.165 5.53505535055351 278 12 100 4 1 271 1911 2188 Longidorus macrosoma 28S ribosomal RNA gene, 28S-18S intergenic spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence blastn 1500 401 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dorylaimida Longidoridae Longidorus Longidorus macrosoma
23332287 23332287 PRJNA312899_P_NODE_82299_length_174_cov_2.432000_g81857_i0 PRJNA312899 82299 174 2.432 4.23168 Caenorhabditis elegans 6239 Nematoda Nematoda 75 3.12e-9   NTclustered gi|687867785|emb|LK929889.1| 6239 g81857 i0 97.674 2.18965517241379 43 1 25 0 1 43 1252 1210 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_contig0001390 blastn 381 75 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27643157 27643157 PRJNA312899_P_NODE_67664_length_199_cov_1.360000_g67222_i0 PRJNA312899 67664 199 1.36 2.7064 Necator americanus 51031 Nematoda Nematoda 65.1 1.89e-10   NR XP_013306179.2 51031 g67222 i0 56.9 4.5678391959799 58 21 81.4 1 37 198 110 167 XP_013306179.2 hypothetical protein RB195_003307 [Necator americanus] diamond 909 65.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
28134253 28134253 PRJNA312899_P_NODE_23265_length_389_cov_6.047059_g22823_i0 PRJNA312899 23265 389 6.047059 23.52305951 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 6.660000000000001e-26   NR KAI1716374.1 166010 g22823 i0 50.9 3.40102827763496 110 52 84.8 1 387 58 299 406 KAI1716374.1 PCI domain-containing protein [Ditylenchus destructor] diamond 1323 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
28306028 28306028 PRJNA312899_P_NODE_64906_length_206_cov_0.974522_g64464_i0 PRJNA312899 64906 206 0.974522 2.00751532 Cooperia oncophora 27828 Nematoda Nematoda 135 6e-36   NR KAK6048272.1 27828 g64464 i0 89.7 1.98058252427184 68 7 99 0 206 3 242 309 KAK6048272.1 hypothetical protein COOONC_14223 [Cooperia oncophora] diamond 408 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
28558777 28558777 PRJNA312899_P_NODE_38627_length_288_cov_21.255230_g38185_i0 PRJNA312899 38627 288 21.25523 61.2150624 Mesorhabditis spiculigera 96644 Nematoda Nematoda 43.1 0.0488   NR CAJ0581155.1 96644 g38185 i0 44.7 0.489583333333333 47 26 49 0 61 201 1014 1060 CAJ0581155.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 141 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
28685117 28685117 PRJNA312899_P_NODE_91007_length_165_cov_0.879310_g90565_i0 PRJNA312899 91007 165 0.87931 1.4508615 Cooperia oncophora 27828 Nematoda Nematoda 109 1.61e-26   NR KAK6048272.1 27828 g90565 i0 96.3 0.981818181818182 54 2 98.2 0 3 164 87 140 KAK6048272.1 hypothetical protein COOONC_14223 [Cooperia oncophora] diamond 162 109 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
28937587 28937587 PRJNA312899_P_NODE_102788_length_161_cov_0.910714_g102346_i0 PRJNA312899 102788 161 0.910714 1.46624954 Caenorhabditis brenneri 135651 Nematoda Nematoda 74.3 1.19e-14   NR CAL2033366.1 135651 g102346 i0 72.4 2.16149068322981 58 10 98.8 2 161 3 103 159 CAL2033366.1 unnamed protein product [Caenorhabditis brenneri] diamond 348 74.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
29316381 29316381 PRJNA312899_P_NODE_409_length_1890_cov_7.426942_g362_i0 PRJNA312899 409 1890 7.426942 140.3692038 Ancylostoma ceylanicum 53326 Nematoda Nematoda 57.8 7.99e-5   NR EYC46279.1 53326 g362 i0 32.8 0.787301587301587 122 75 19 4 577 936 14 130 EYC46279.1 hypothetical protein Y032_0402g803 [Ancylostoma ceylanicum] diamond 1488 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
29505715 29505715 PRJNA312899_P_NODE_13710_length_510_cov_3.360087_g13279_i0 PRJNA312899 13710 510 3.360087 17.1364437 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 128 1.99e-34   NR CAD5224984.1 6326 g13279 i0 50.4 0.829411764705882 141 65 81.2 3 63 476 4 142 CAD5224984.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 423 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30453681 30453681 PRJNA312899_P_NODE_51173_length_242_cov_7.373057_g50731_i0 PRJNA312899 51173 242 7.373057 17.84279794 Caenorhabditis bovis 2654633 Nematoda Nematoda 47.8 6.05e-4   NR CAB3402077.1 2654633 g50731 i0 35.4 4.04132231404959 82 47 94.2 2 236 9 294 375 CAB3402077.1 unnamed protein product [Caenorhabditis bovis] diamond 978 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis bovis
30786945 30786945 PRJNA312899_P_NODE_4354_length_857_cov_5.482673_g4073_i0 PRJNA312899 4354 857 5.482673 46.98650761 Rhabditida 6236 Nematoda Nematoda 88.6 1.14e-15   NR XP_024508479.1 34506 g4073 i0 41.5 1.65577596266044 106 46 37.1 3 296 613 166 255 XP_024508479.1 Alpha-(1,6)-fucosyltransferase [Strongyloides ratti] diamond 1419 89 0.995505617977528 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32792213 32792213 PRJNA312899_P_NODE_6800_length_713_cov_5.155120_g6447_i0 PRJNA312899 6800 713 5.15512 36.7560056 Auanema sp. JU1783 2878363 Nematoda Nematoda 135 4.28e-35   NR CAI4222680.1 2878363 g6447 i0 55.3 2.58345021037868 123 51 51.3 2 2 367 134 253 CAI4222680.1 unnamed protein product [Auanema sp. JU1783] diamond 1842 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;