RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA312899", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14408054 14408054 PRJNA312899_P_NODE_1972_length_1138_cov_5.636364_g1788_i0 PRJNA312899 1972 1138 5.636364 64.14182232 Paraphysoderma sedebokerense 1500003 Fungi Fungi 266 9.31e-79   NR KAI9136480.1 1500003 g1788 i0 56.7 3.93321616871705 254 98 63.8 2 1138 413 432 685 KAI9136480.1 mcm domain-containing protein [Paraphysoderma sedebokerense] diamond 4476 266 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
26599133 26599133 PRJNA312899_P_NODE_10341_length_588_cov_8.259740_g9930_i0 PRJNA312899 10341 588 8.25974 48.5672712 Paraphysoderma sedebokerense 1500003 Fungi Fungi 80.5 1.05e-13   NR KAI9144974.1 1500003 g9930 i0 32.3 0.790816326530612 155 98 78.1 3 476 18 1227 1376 KAI9144974.1 hypothetical protein BKA69DRAFT_648959 [Paraphysoderma sedebokerense] diamond 465 80.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
26662481 26662481 PRJNA312899_P_NODE_59721_length_219_cov_1.200000_g59279_i0 PRJNA312899 59721 219 1.2 2.628 Paraphysoderma sedebokerense 1500003 Fungi Fungi 112 1.47e-29   NR KAI9136236.1 1500003 g59279 i0 72.2 4.82191780821918 72 20 98.6 0 219 4 91 162 KAI9136236.1 cyclophilin-like domain-containing protein [Paraphysoderma sedebokerense] diamond 1056 112 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
27232283 27232283 PRJNA312899_P_NODE_2363_length_1065_cov_12.305118_g2158_i0 PRJNA312899 2363 1065 12.305118 131.0495067 Coelomomyces lativittatus 945690 Fungi Fungi 239 2.11e-73   NR KAJ1516618.1 945690 g2158 i0 43.7 5.54366197183099 279 155 78.3 2 85 918 5 282 KAJ1516618.1 hypothetical protein HMI54_008776 [Coelomomyces lativittatus] diamond 5904 239 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
28400737 28400737 PRJNA312899_P_NODE_32846_length_319_cov_4.477778_g32404_i0 PRJNA312899 32846 319 4.477778 14.28411182 Blastocladiella britannica 64508 Fungi Fungi 47.8 3.92e-4   NR KAI9217749.1 64508 g32404 i0 28.1 3.87460815047022 96 53 79.9 4 16 270 35 125 KAI9217749.1 hypothetical protein BC828DRAFT_408214, partial [Blastocladiella britannica] diamond 1236 47.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
29032473 29032473 PRJNA312899_P_NODE_49848_length_247_cov_1.030303_g49406_i0 PRJNA312899 49848 247 1.030303 2.54484841 Allomyces arbusculus 64504 Fungi Fungi 58.5 9.48e-8   NR KAJ3373438.1 64504 g49406 i0 52.3 0.534412955465587 44 21 53.4 0 236 105 270 313 KAJ3373438.1 Diphthine methyltransferase [Allomyces arbusculus] diamond 132 58.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
30011239 30011239 PRJNA312899_P_NODE_19011_length_433_cov_7.833333_g18570_i0 PRJNA312899 19011 433 7.833333 33.91833189 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 58.5 8.78e-7   NR KNE57499.1 578462 g18570 i0 31.2 1.94688221709007 141 60 73.4 6 2 319 348 486 KNE57499.1 hypothetical protein AMAG_18058 [Allomyces macrogynus ATCC 38327] diamond 843 58.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32729510 32729510 PRJNA312899_P_NODE_56020_length_228_cov_8.301676_g55578_i0 PRJNA312899 56020 228 8.301676 18.92782128 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 60.1 2.28e-8   NR KNE56974.1 578462 g55578 i0 61.5 0.684210526315789 52 20 68.4 0 3 158 417 468 KNE56974.1 hypothetical protein AMAG_02737 [Allomyces macrogynus ATCC 38327] diamond 156 60.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;