RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA312899" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA312899 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15682520 15682520 PRJNA312899_P_NODE_57693_length_224_cov_1.165714_g57251_i0 PRJNA312899 57693 224 1.165714 2.61119936 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 52.8 0.02   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g57251 i0 100 0.125 28 0 13 0 93 120 261172 261145 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
24605891 24605891 PRJNA312899_P_NODE_59100_length_220_cov_2.561404_g58658_i0 PRJNA312899 59100 220 2.561404 5.6350888 Medusavirus sp. 'euryale' 3349365 Viruses Viruses 233 6.48e-57   NTclustered gi|2835536555|dbj|LC847964.1| 3349365 g58658 i0 88.889 29.9181818181818 189 21 86 0 30 218 350966 351154 Medusavirus sp. 'euryale' F10 DNA, nearly complete sequence blastn 6582 233 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes   Mamonoviridae Medusavirus Medusavirus sp. 'euryale'
27390501 27390501 PRJNA312899_P_NODE_23023_length_391_cov_7.225146_g22581_i0 PRJNA312899 23023 391 7.225146 28.25032086 Adintovirus tegillarca14448 3115949 Viruses Viruses 99.8 6.449999999999999e-23   NR DBA51532.1 3115949 g22581 i0 48 0.782608695652174 102 52 78.3 1 17 322 102 202 DBA51532.1 MAG TPA_asm: PacK [Adintovirus tegillarca14448] diamond 306 99.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus tegillarca14448

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;