RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312899", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26757643 26757643 PRJNA312899_P_NODE_47201_length_255_cov_5.417476_g46759_i0 PRJNA312899 47201 255 5.417476 13.8145638 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.5 4.9e-9   NR ETO26787.1 46433 g46759 i0 63.4 2.37647058823529 41 14 48.2 1 181 59 88 127 ETO26787.1 cupin family protein [Reticulomyxa filosa] diamond 606 60.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28274327 28274327 PRJNA312899_P_NODE_37346_length_295_cov_1.520325_g36904_i0 PRJNA312899 37346 295 1.520325 4.48495875 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 76.3 1.14e-13   NR ETO18377.1 46433 g36904 i0 40.5 0.854237288135593 84 50 85.4 0 3 254 262 345 ETO18377.1 peptidase C19 family ubiquitinyl hydrolase, partial [Reticulomyxa filosa] diamond 252 76.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;