RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA312899", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 10 ✖

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA312899 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
379374 379374 PRJNA312899_P_NODE_31581_length_327_cov_3.413669_g31139_i0 PRJNA312899 31581 327 3.413669 11.16269763 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 438 2.02e-118   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g31139 i0 91.131 32.4954128440367 327 23 100 6 1 327 102 422 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 10626 438 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
15092654 15092654 PRJNA312899_P_NODE_72812_length_189_cov_1.078571_g72370_i0 PRJNA312899 72812 189 1.078571 2.03849919 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|916426793|ref|XM_013379174.1| 5802 g72370 i0 100 2.34391534391534 29 0 15 0 146 174 142 170 Eimeria tenella uncharacterized protein (ETH_00018000), partial mRNA blastn 443 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
15681775 15681775 PRJNA312899_P_NODE_14613_length_494_cov_2.424719_g14180_i0 PRJNA312899 14613 494 2.424719 11.97811186 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|261883347|gb|GQ282199.1| 36329 g14180 i0 96.97 0.0668016194331984 33 1 7 0 31 63 20 52 Plasmodium falciparum 3D7 Pfa-npcR6867, complete sequence blastn 33 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
18231749 18231749 PRJNA312899_P_NODE_70975_length_191_cov_2.042254_g70533_i0 PRJNA312899 70975 191 2.042254 3.90070514 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 150 5.66e-32   NTclustered gi|820695469|tpe|LN714488.1| 572307 g70533 i0 86.331 4.93193717277487 139 17 100 2 54 191 96420 96557 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 942 150 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20781560 20781560 PRJNA312899_P_NODE_70417_length_192_cov_2.853147_g69975_i0 PRJNA312899 70417 192 2.853147 5.47804224 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 342 8.759999999999999e-90   NTclustered gi|820695469|tpe|LN714488.1| 572307 g69975 i0 98.958 13.0104166666667 192 1 99 1 1 191 301556 301365 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2498 342 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23331397 23331397 PRJNA312899_P_NODE_29919_length_337_cov_19.611111_g29477_i0 PRJNA312899 29919 337 19.611111 66.08944407 Plasmodium coatneyi 208452 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.032   NTclustered gi|1139859519|ref|XM_020057520.1| 208452 g29477 i0 100 0.0830860534124629 28 0 8 0 80 107 9043 9070 Plasmodium coatneyi Cysteine repeat modular protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium coatneyi
24605251 24605251 PRJNA312899_P_NODE_25240_length_372_cov_4.479876_g24798_i0 PRJNA312899 25240 372 4.479876 16.66513872 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|921125473|ref|XM_013581892.1| 51315 g24798 i0 100 0.153225806451613 29 0 8 0 81 109 1835 1807 Eimeria necatrix zinc finger (C3HC4 RING finger) protein, putative partial mRNA blastn 57 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
24605524 24605524 PRJNA312899_P_NODE_39760_length_283_cov_11.384615_g39318_i0 PRJNA312899 39760 283 11.384615 32.21846045 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 302 2.35e-77   NTclustered gi|820695469|tpe|LN714488.1| 572307 g39318 i0 86.102 42.7279151943463 295 24 100 3 5 283 97085 96792 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 12092 302 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
26838908 26838908 PRJNA312899_P_NODE_81201_length_176_cov_2.409449_g80759_i0 PRJNA312899 81201 176 2.409449 4.24063024 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.5 1.26e-7   NR KAF8822859.1 476202 g80759 i0 69.7 10.4488636363636 33 10 56.3 0 9 107 121 153 KAF8822859.1 ribosomal protein RPS18 [Cardiosporidium cionae] diamond 1839 55.8 0.99462365591397806 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
30042655 30042655 PRJNA312899_P_NODE_29771_length_338_cov_15.934256_g29329_i0 PRJNA312899 29771 338 15.934256 53.85778528 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 50.8 2.94e-5   NR XP_013234781.1 5802 g29329 i0 41.4 0.514792899408284 58 34 51.5 0 336 163 56 113 XP_013234781.1 uncharacterized protein ETH_00032675 [Eimeria tenella] diamond 174 50.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;