RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312899", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Peregrinibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA312899 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10583207 10583207 PRJNA312899_P_NODE_28029_length_350_cov_29.730897_g27587_i0 PRJNA312899 28029 350 29.730897 104.0581395 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 453 7.760000000000001e-123   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g27587 i0 90.23 78.1257142857143 348 33 99 1 3 350 814382 814036 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 27344 453 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
31116714 31116714 PRJNA312899_P_NODE_97135_length_163_cov_0.894737_g96693_i0 PRJNA312899 97135 163 0.894737 1.45842131 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 47.4 2.85e-4   NR MCC6643439.1 2030811 g96693 i0 44 0.920245398773006 50 28 92 0 12 161 374 423 MCC6643439.1 NAD(+) synthase [Candidatus Peregrinibacteria bacterium] diamond 150 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;