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contig_metadata

4 rows where bioproject = "PRJNA312899", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA312899 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28495625 28495625 PRJNA312899_P_NODE_85967_length_167_cov_0.864407_g85525_i0 PRJNA312899 85967 167 0.864407 1.44355969 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 95.5 1.89e-21   NR MEN9413010.1 2762014 g85525 i0 78.2 0.988023952095808 55 12 98.8 0 3 167 325 379 MEN9413010.1 Cyanophycin synthetase [Candidatus Parcubacteria bacterium] diamond 165 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28842657 28842657 PRJNA312899_P_NODE_8728_length_638_cov_40.254669_g8340_i0 PRJNA312899 8728 638 40.254669 256.82478822 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 312 1.09e-105   NR MEY4723553.1 2762014 g8340 i0 75.6 0.926332288401254 197 48 92.6 0 633 43 4 200 MEY4723553.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 591 312 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29252983 29252983 PRJNA312899_P_NODE_2969_length_984_cov_15.690909_g2734_i0 PRJNA312899 2969 984 15.690909 154.39854456 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 190 3.08e-51   NR MBX4189759.1 2762014 g2734 i0 50.5 0.634146341463415 208 98 63.1 2 1 621 463 666 MBX4189759.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 624 190 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30137085 30137085 PRJNA312899_P_NODE_1192_length_1348_cov_19.475751_g1083_i0 PRJNA312899 1192 1348 19.475751 262.53312348 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 486 1.3999999999999994e-163   NR MBX4189759.1 2762014 g1083 i0 59.4 0.861275964391691 387 155 85.9 2 190 1347 6 391 MBX4189759.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 1161 486 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;