RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA312899", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA312899 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2931099 2931099 PRJNA312899_P_NODE_95983_length_163_cov_1.789474_g95541_i0 PRJNA312899 95983 163 1.789474 2.91684262 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 132 1.7e-26   NTclustered gi|2874253687|emb|OY969413.1| 2030810 g95541 i0 81.928 4.86503067484663 166 21 99 6 1 162 886208 886048 MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 blastn 793 132 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
5482971 5482971 PRJNA312899_P_NODE_39665_length_284_cov_2.102128_g39223_i0 PRJNA312899 39665 284 2.102128 5.97004352 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 118 1.76e-28   NR OGG61329.1 1798491 g39223 i0 66.7 1.97535211267606 93 27 98.2 1 5 283 585 673 OGG61329.1 MAG: DNA topoisomerase IV subunit B [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_34] diamond 561 118 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_34
29694931 29694931 PRJNA312899_P_NODE_43850_length_267_cov_3.665138_g43408_i0 PRJNA312899 43850 267 3.665138 9.78591846 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 90.1 3.25e-19   NR MBM3272823.1 2030810 g43408 i0 62.1 1.48314606741573 66 25 74.2 0 68 265 1 66 MBM3272823.1 integrase [Candidatus Kaiserbacteria bacterium] diamond 396 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
30105807 30105807 PRJNA312899_P_NODE_99792_length_162_cov_0.902655_g99350_i0 PRJNA312899 99792 162 0.902655 1.4623011 Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_ 2030810 Bacteria Bacteria 44.3 0.00106   NR OGG74537.1 1798510 g99350 i0 34.6 0.962962962962963 52 34 96.3 0 162 7 10 61 OGG74537.1 MAG: hypothetical protein A3A37_00620 [Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_52_36] diamond 156 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_52_36

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;