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contig_metadata

23 rows where bioproject = "PRJNA312615" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 23 ✖

bioproject 1

  • PRJNA312615 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2929458 2929458 PRJNA312615_P_NODE_7583_length_446_cov_1.410579_g7433_i0 PRJNA312615 7583 446 1.410579 6.29118234 Campylobacter phage CJLB-4 2781358 Viruses Viruses 56.2 1.31e-7   NR QPB10331.1 2781358 g7433 i0 66.7 0.302690582959641 45 15 30.3 0 290 156 10 54 QPB10331.1 hypothetical protein [Campylobacter phage CJLB-4] diamond 135 56.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Campylobacter phage CJLB-4
5482033 5482033 PRJNA312615_P_NODE_50045_length_169_cov_0.866667_g49894_i0 PRJNA312615 50045 169 0.866667 1.46466723 Cutibacterium phage vB_CacS-HV1 3236917 Viruses Viruses 307 2.73e-79   NTclustered gi|2780182484|gb|PQ037195.1| 3236917 g49894 i0 99.408 99.7041420118343 169 1 100 0 1 169 192 360 Cutibacterium phage vB_CacS-HV1, complete genome blastn 16850 307 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Cutibacterium phage vB_CacS-HV1
11857047 11857047 PRJNA312615_P_NODE_42770_length_187_cov_1.420290_g42619_i0 PRJNA312615 42770 187 1.42029 2.6559423 Pyongtaek Culex Ribovirus 2902618 Viruses Viruses 307 3.09e-79   NTclustered gi|2163656929|gb|MT568536.1| 2902618 g42619 i0 96.257 1.60427807486631 187 7 100 0 1 187 9047 8861 MAG: Pyongtaek Culex Ribovirus isolate A18.4517 genomic sequence, sequence blastn 300 307 1 Viruses               Pyongtaek Culex Ribovirus
13132033 13132033 PRJNA312615_P_NODE_37611_length_200_cov_1.350993_g37460_i0 PRJNA312615 37611 200 1.350993 2.701986 Caudoviricetes sp. 2832643 Viruses Viruses 220 4.5e-53   NTclustered gi|2914775648|gb|OR222112.1| 2832643 g37460 i0 91.772 30.48 158 13 79 0 3 160 12602 12445 MAG: Caudoviricetes sp. isolate MSP0869 genomic sequence blastn 6096 220 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20190020 20190020 PRJNA312615_P_NODE_35236_length_206_cov_51.191083_g35085_i0 PRJNA312615 35236 206 51.191083 105.45363098 root 1 Root_unresolved Root_unresolved 267 5.91e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g35085 i0 100 69.9029126213592 144 0 70 0 7 150 11379 11236 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14400 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22741020 22741020 PRJNA312615_P_NODE_58938_length_155_cov_2.896226_g58787_i0 PRJNA312615 58938 155 2.896226 4.4891503 Viruses 10239 Viruses Viruses 287 3.21e-73   NTclustered gi|1631923064|ref|NC_041928.1| 1340769 g58787 i0 100 17 155 0 100 0 1 155 12348 12502 Staphylococcus phage phiIBB-SEP1, complete genome blastn 2635 287 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Sepunavirus Sepunavirus SEP1
23330576 23330576 PRJNA312615_P_NODE_48799_length_171_cov_2.122951_g48648_i0 PRJNA312615 48799 171 2.122951 3.63024621 Caudoviricetes sp. 2832643 Viruses Viruses 316 4.6e-82   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g48648 i0 100 1 171 0 100 0 1 171 25627 25457 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 171 316 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23330620 23330620 PRJNA312615_P_NODE_50639_length_168_cov_0.873950_g50488_i0 PRJNA312615 50639 168 0.87395 1.468236 Caudoviricetes sp. 2832643 Viruses Viruses 87.9 3.87e-13   NTclustered gi|2914888655|gb|OR222597.1| 2832643 g50488 i0 80 10.6130952380952 130 16 74 8 37 161 87859 87735 MAG: Caudoviricetes sp. isolate MSP0337 genomic sequence blastn 1783 87.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24015780 24015780 PRJNA312615_P_NODE_36379_length_203_cov_23.019481_g36228_i0 PRJNA312615 36379 203 23.019481 46.72954643 root 1 Root_unresolved Root_unresolved 274 3.47e-69   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g36228 i0 100 92.2955665024631 148 0 93 0 1 148 28637 28490 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18736 274 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25289857 25289857 PRJNA312615_P_NODE_16240_length_304_cov_20.929412_g16089_i0 PRJNA312615 16240 304 20.929412 63.62541248 root 1 Root_unresolved Root_unresolved 516 8.36e-142   NTclustered gi|2620236085|gb|OR777220.1| 10515 g16089 i0 98.962 95.0822368421053 289 1 95 2 6 293 14830 15117 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 28905 516 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25290095 25290095 PRJNA312615_P_NODE_35980_length_204_cov_42.277419_g35829_i0 PRJNA312615 35980 204 42.277419 86.24593476 root 1 Root_unresolved Root_unresolved 263 7.549999999999999e-66   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g35829 i0 98.658 73.0392156862745 149 1 73 1 1 148 11551 11403 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14900 263 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
27737998 27737998 PRJNA312615_P_NODE_56904_length_163_cov_0.894737_g56753_i0 PRJNA312615 56904 163 0.894737 1.45842131 Klosneuvirus KNV1 1977640 Viruses Viruses 55.1 5.41e-7   NR ARF12097.1 1977640 g56753 i0 51.9 0.957055214723926 52 24 93.9 1 9 161 107 158 ARF12097.1 hypothetical protein Klosneuvirus_3_232 [Klosneuvirus KNV1] diamond 156 55.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
28779468 28779468 PRJNA312615_P_NODE_6387_length_482_cov_1.279446_g6239_i0 PRJNA312615 6387 482 1.279446 6.16692972 Enterobacteria phage IME1 1090133 Viruses Viruses 117 4.56e-29   NR YP_007004316.1 1090133 g6239 i0 46.5 0.79045643153527 127 68 79 0 480 100 27 153 YP_007004316.1 regulatory protein Q [Enterobacteria phage IME10] diamond 381 117 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lederbergvirus Enterobacteria phage IME10
28937567 28937567 PRJNA312615_P_NODE_14148_length_327_cov_1.107914_g13997_i0 PRJNA312615 14148 327 1.107914 3.62287878 Escherichia phage Lambda 2681611 Viruses Viruses 71.2 6.81e-14   NR NP_040643.1 2681611 g13997 i0 46.9 0.587155963302752 64 34 58.7 0 120 311 1 64 NP_040643.1 hypothetical protein lambdap73 [Escherichia phage Lambda] diamond 192 71.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Lambdavirus lambda
29442404 29442404 PRJNA312615_P_NODE_32490_length_215_cov_0.861446_g32339_i0 PRJNA312615 32490 215 0.861446 1.8521089 Multiple sclerosis associated retrovirus element 89382 Viruses Viruses 41.6 0.00877   NR AAD48373.1 89382 g32339 i0 55.9 0.474418604651163 34 15 47.4 0 102 1 14 47 AAD48373.1 unknown protein U5/2 [Multiple sclerosis associated retrovirus element] diamond 102 41.6 1 Viruses Human endogenous retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Human endogenous retrovirus W
29537326 29537326 PRJNA312615_P_NODE_45190_length_181_cov_1.515152_g45039_i0 PRJNA312615 45190 181 1.515152 2.74242512 Fadolivirus algeromassiliense 3060017 Viruses Viruses 89.7 2.95e-19   NR YP_010803269.1 3060017 g45039 i0 70.7 0.961325966850829 58 17 96.1 0 179 6 292 349 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 174 89.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
29726543 29726543 PRJNA312615_P_NODE_17690_length_291_cov_1.140496_g17539_i0 PRJNA312615 17690 291 1.140496 3.31884336 Caudoviricetes sp. 2832643 Viruses Viruses 91.7 1.48e-21   NR DAH93386.1 2832643 g17539 i0 69.7 1.36082474226804 66 20 68 0 290 93 48 113 DAH93386.1 MAG TPA: hypothetical protein, partial [Caudoviricetes sp.] diamond 396 91.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29916471 29916471 PRJNA312615_P_NODE_44071_length_184_cov_1.133333_g43920_i0 PRJNA312615 44071 184 1.133333 2.08533272 Adintovirus bos4377 3115894 Viruses Viruses 57 4.79e-8   NR DBA50495.1 3115894 g43920 i0 46.7 0.978260869565217 60 32 97.8 0 3 182 110 169 DBA50495.1 MAG TPA_asm: Adenain [Adintovirus bos4377] diamond 180 57 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30168844 30168844 PRJNA312615_P_NODE_50092_length_169_cov_0.866667_g49941_i0 PRJNA312615 50092 169 0.866667 1.46466723 Adintovirus bos4377 3115894 Viruses Viruses 47.4 2.79e-4   NR DBA50496.1 3115894 g49941 i0 65.6 0.568047337278107 32 11 56.8 0 3 98 178 209 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 96 47.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30737663 30737663 PRJNA312615_P_NODE_56954_length_163_cov_0.894737_g56803_i0 PRJNA312615 56954 163 0.894737 1.45842131 uncultured Caudovirales phage 2100421 Viruses Viruses 94.7 3.78e-21   NR CAB4147586.1 2100421 g56803 i0 81.1 3.92024539877301 53 10 97.5 0 5 163 269 321 CAB4147586.1 phage_term_2, phage terminase, large subunit, PBSX family [uncultured Caudovirales phage] diamond 639 94.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
30800843 30800843 PRJNA312615_P_NODE_24954_length_245_cov_0.872449_g24803_i0 PRJNA312615 24954 245 0.872449 2.13750005 Pimephales minnow adintovirus 2609864 Viruses Viruses 68.6 2.59e-11   NR DAC81401.1 2609864 g24803 i0 48.8 2.00816326530612 82 41 99.2 1 244 2 169 250 DAC81401.1 TPA_asm: integrase [Pimephales minnow adintovirus] diamond 492 68.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31306537 31306537 PRJNA312615_P_NODE_415_length_1349_cov_1.535385_g360_i0 PRJNA312615 415 1349 1.535385 20.71234365 Escherichia phage Kati 3233700 Viruses Viruses 190 7.04e-51   NR XNS38751.1 3233700 g360 i0 54.6 1.22535211267606 185 84 41.1 0 5 559 314 498 XNS38751.1 hypothetical protein WLKYIJTT_CDS0034 [Escherichia phage Kati] diamond 1653 190 1 Viruses               Escherichia phage Kati
32729466 32729466 PRJNA312615_P_NODE_19580_length_275_cov_2.030973_g19429_i0 PRJNA312615 19580 275 2.030973 5.58517575 Caudoviricetes sp. 2832643 Viruses Viruses 64.3 2.52e-11   NR DAI56203.1 2832643 g19429 i0 66.7 0.523636363636364 48 16 52.4 0 192 49 24 71 DAI56203.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 144 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;