RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA312615" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312615 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13131702 13131702 PRJNA312615_P_NODE_20531_length_269_cov_1.181818_g20380_i0 PRJNA312615 20531 269 1.181818 3.17909042 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 147 1.3799999999999999e-43   NR GJM17621.1 2202153 g20380 i0 77.4 0.936802973977695 84 19 93.7 0 2 253 52 135 GJM17621.1 MAG: hypothetical protein DHS20C13_29480 [Thermodesulfobacteriota bacterium] diamond 252 147 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
25289919 25289919 PRJNA312615_P_NODE_21580_length_262_cov_2.136150_g21429_i0 PRJNA312615 21580 262 2.13615 5.596713 Desulfobulbaceae bacterium BRH_c16a 1629713 Bacteria Bacteria 119 6.349999999999999e-30   NR KJS02832.1 1629713 g21429 i0 60.9 0.99618320610687 87 34 99.6 0 2 262 7 93 KJS02832.1 MAG: hypothetical protein VR65_03850 [Desulfobulbaceae bacterium BRH_c16a] diamond 261 119 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium BRH_c16a
26599119 26599119 PRJNA312615_P_NODE_32421_length_215_cov_1.222892_g32270_i0 PRJNA312615 32421 215 1.222892 2.6292178 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 86.3 6.4e-19   NR MBG0776896.1 2049043 g32270 i0 59.2 8.91627906976744 71 29 99.1 0 214 2 100 170 MBG0776896.1 NAD(P)H:quinone oxidoreductase [Desulfovibrionaceae bacterium] diamond 1917 86.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
26789545 26789545 PRJNA312615_P_NODE_12101_length_355_cov_4.535948_g11951_i0 PRJNA312615 12101 355 4.535948 16.1026154 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 46.6 0.00387   NR GJM17643.1 2202153 g11951 i0 33.8 0.650704225352113 77 50 64.2 1 351 124 137 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 231 46.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27895421 27895421 PRJNA312615_P_NODE_20365_length_270_cov_1.361991_g20214_i0 PRJNA312615 20365 270 1.361991 3.6773757 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 61.6 4.29e-9   NR GJM17643.1 2202153 g20214 i0 35 0.888888888888889 80 51 87.8 1 239 3 133 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 240 61.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
28558734 28558734 PRJNA312615_P_NODE_22847_length_255_cov_1.368932_g22696_i0 PRJNA312615 22847 255 1.368932 3.4907766 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 54.7 1.85e-7   NR MDH3360097.1 2053307 g22696 i0 44.4 0.847058823529412 72 32 82.4 3 45 254 4 69 MDH3360097.1 helix-turn-helix domain-containing protein [Desulfobulbaceae bacterium] diamond 216 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
30516577 30516577 PRJNA312615_P_NODE_34253_length_209_cov_2.118750_g34102_i0 PRJNA312615 34253 209 2.11875 4.4281875 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 68.6 1.88e-11   NR HAO22905.1 2049433 g34102 i0 46.5 1.01913875598086 71 35 97.6 1 3 206 286 356 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 213 68.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32002510 32002510 PRJNA312615_P_NODE_24438_length_247_cov_1.545455_g24287_i0 PRJNA312615 24438 247 1.545455 3.81727385 Syntrophorhabdus sp. PtaU1.Bin 2699756 Bacteria Bacteria 49.7 1.47e-4   NR OPY76594.1 1811703 g24287 i0 32.9 0.923076923076923 76 31 92.3 2 11 238 1369 1424 OPY76594.1 MAG: tRNA nuclease WapA precursor [Syntrophorhabdus sp. PtaU1.Bin050] diamond 228 49.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae Syntrophorhabdus Syntrophorhabdus sp. PtaU1.Bin050

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;