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contig_metadata

16 rows where bioproject = "PRJNA312615" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312615 · 16 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3614393 3614393 PRJNA312615_P_NODE_27143_length_235_cov_0.978495_g26992_i0 PRJNA312615 27143 235 0.978495 2.29946325 Polyangiales 3031712 Bacteria Bacteria 123 8.22e-33   NR HRI66518.1 57 g26992 i0 76 41.1446808510638 75 18 95.7 0 2 226 57 131 HRI66518.1 CoA transferase subunit A [Polyangium sp.] diamond 9669 124 0.991935483870968 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
14407028 14407028 PRJNA312615_P_NODE_27892_length_231_cov_2.467033_g27741_i0 PRJNA312615 27892 231 2.467033 5.69884623 root 1 Root_unresolved Root_unresolved 97.1 6.76e-23   NR WP_050430790.1 52 g27741 i0 71.9 4.18181818181818 64 18 83.1 0 11 202 150 213 WP_050430790.1 maleylacetoacetate isomerase [Chondromyces crocatus] diamond 966 97.4 0.996919917864476 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
26725668 26725668 PRJNA312615_P_NODE_26381_length_238_cov_1.079365_g26230_i0 PRJNA312615 26381 238 1.079365 2.5688887 Polyangium sp. 3409587 Bacteria Bacteria 58.5 9.25e-8   NR HRI69950.1 57 g26230 i0 50.7 3.3781512605042 67 27 84.5 1 35 235 218 278 HRI69950.1 dihydrolipoamide acetyltransferase family protein [Polyangium sp.] diamond 804 58.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
27548157 27548157 PRJNA312615_P_NODE_17024_length_297_cov_1.572581_g16873_i0 PRJNA312615 17024 297 1.572581 4.67056557 Myxococcales bacterium 2026763 Bacteria Bacteria 73.9 1.67e-13   NR MCA9619831.1 2026763 g16873 i0 43.8 1.7979797979798 89 48 87.9 1 296 36 60 148 MCA9619831.1 endonuclease/exonuclease/phosphatase family protein [Myxococcales bacterium] diamond 534 73.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27674714 27674714 PRJNA312615_P_NODE_17104_length_296_cov_2.064777_g16953_i0 PRJNA312615 17104 296 2.064777 6.11173992 Myxococcota bacterium 2818507 Bacteria Bacteria 85.5 6.15e-17   NR MCK6510237.1 2818507 g16953 i0 46.4 3.9222972972973 97 51 98.3 1 292 2 392 487 MCK6510237.1 leucyl aminopeptidase [Myxococcota bacterium] diamond 1161 85.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27895436 27895436 PRJNA312615_P_NODE_5805_length_504_cov_1.547253_g5657_i0 PRJNA312615 5805 504 1.547253 7.79815512 Myxococcales bacterium 2026763 Bacteria Bacteria 101 1.69e-21   NR MBL8606644.1 2026763 g5657 i0 49 1.24404761904762 102 48 58.3 2 455 162 328 429 MBL8606644.1 hypothetical protein [Myxococcales bacterium] diamond 627 101 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28021982 28021982 PRJNA312615_P_NODE_37685_length_200_cov_1.284768_g37534_i0 PRJNA312615 37685 200 1.284768 2.569536 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42.4 0.0113   NR MEK7841985.1 2026735 g37534 i0 38.5 0.585 39 24 58.5 0 19 135 8 46 MEK7841985.1 two-component regulator propeller domain-containing protein [Deltaproteobacteria bacterium] diamond 117 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28779448 28779448 PRJNA312615_P_NODE_22787_length_255_cov_2.019417_g22636_i0 PRJNA312615 22787 255 2.019417 5.14951335 Vulgatibacter sp. 1971226 Bacteria Bacteria 87 6.79e-19   NR HWV37543.1 1971226 g22636 i0 55.4 0.976470588235294 83 34 97.6 2 5 253 29 108 HWV37543.1 maleylacetoacetate isomerase [Vulgatibacter sp.] diamond 249 87 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Vulgatibacteraceae Vulgatibacter Vulgatibacter sp.
28969134 28969134 PRJNA312615_P_NODE_23848_length_250_cov_1.363184_g23697_i0 PRJNA312615 23848 250 1.363184 3.40796 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.1 0.0297   NR MBI5611083.1 2026735 g23697 i0 39.3 0.732 61 35 73.2 1 47 229 261 319 MBI5611083.1 bacillithiol biosynthesis cysteine-adding enzyme BshC [Deltaproteobacteria bacterium] diamond 183 43.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29505704 29505704 PRJNA312615_P_NODE_41090_length_191_cov_1.422535_g40939_i0 PRJNA312615 41090 191 1.422535 2.71704185 Polyangiales bacterium 3034171 Bacteria Bacteria 76.3 2.86e-14   NR MFO0694287.1 3034171 g40939 i0 60 1.47643979057592 50 19 77 1 1 147 51 100 MFO0694287.1 thrombospondin type 3 repeat-containing protein [Polyangiales bacterium] diamond 282 76.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
30168838 30168838 PRJNA312615_P_NODE_24672_length_246_cov_1.477157_g24521_i0 PRJNA312615 24672 246 1.477157 3.63380622 Stigmatella aurantiaca DW4/3-1 378806 Bacteria Bacteria 44.7 0.00844   NR EAU62172.1 378806 g24521 i0 42.9 1.32926829268293 49 24 57.3 2 213 73 6 52 EAU62172.1 conserved hypothetical protein, partial [Stigmatella aurantiaca DW4/3-1] diamond 327 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella aurantiaca
30674468 30674468 PRJNA312615_P_NODE_41873_length_189_cov_1.457143_g41722_i0 PRJNA312615 41873 189 1.457143 2.75400027 Myxococcota bacterium 2818507 Bacteria Bacteria 129 2.8e-36   NR MEZ0314212.1 2818507 g41722 i0 100 1 63 0 100 0 1 189 56 118 MEZ0314212.1 hypothetical protein [Myxococcota bacterium] diamond 189 129 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30706051 30706051 PRJNA312615_P_NODE_41134_length_191_cov_1.211268_g40983_i0 PRJNA312615 41134 191 1.211268 2.31352188 Myxococcota bacterium 2818507 Bacteria Bacteria 86.7 1.71e-19   NR MCK6502336.1 2818507 g40983 i0 69.5 0.926701570680628 59 16 92.7 1 3 179 116 172 MCK6502336.1 peptidylprolyl isomerase [Myxococcota bacterium] diamond 177 86.7 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30706052 30706052 PRJNA312615_P_NODE_42614_length_187_cov_2.188406_g42463_i0 PRJNA312615 42614 187 2.188406 4.09231922 Bradymonadia bacterium 3121696 Bacteria Bacteria 81.3 2.23e-16   NR MFT6396027.1 3121696 g42463 i0 81.4 1.37967914438503 43 8 69 0 57 185 3 45 MFT6396027.1 malate dehydrogenase [Bradymonadia bacterium] diamond 258 81.3 1 Bacteria   Pseudomonadati Myxococcota Bradymonadia       Bradymonadia bacterium
32855302 32855302 PRJNA312615_P_NODE_9020_length_411_cov_1.635359_g8870_i0 PRJNA312615 9020 411 1.635359 6.72132549 Polyangiaceae bacterium 2268199 Bacteria Bacteria 45.4 0.0233   NR HRH00199.1 2268199 g8870 i0 40.5 0.613138686131387 84 41 61.3 2 25 276 302 376 HRH00199.1 polysaccharide deacetylase family protein [Polyangiaceae bacterium] diamond 252 45.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32904270 32904270 PRJNA312615_P_NODE_38620_length_197_cov_2.175676_g38469_i0 PRJNA312615 38620 197 2.175676 4.28608172 Pseudomonadati 3379134 Bacteria Bacteria 68.2 2.19e-11   NR MEE2961094.1 2818507 g38469 i0 90 7.15736040609137 30 3 45.7 0 197 108 931 960 MEE2961094.1 aminomethyl-transferring glycine dehydrogenase [Myxococcota bacterium] diamond 1410 68.6 0.994169096209913 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;