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contig_metadata

14 rows where bioproject = "PRJNA312615" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312615 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9305847 9305847 PRJNA312615_P_NODE_15128_length_316_cov_1.576779_g14977_i0 PRJNA312615 15128 316 1.576779 4.98262164 Bryobacterales bacterium 2026791 Bacteria Bacteria 54.7 0.008   NTclustered gi|2874254061|emb|OY970385.1| 2026791 g14977 i0 100 0.0917721518987342 29 0 9 0 193 221 1747555 1747583 MAG: Bryobacterales bacterium isolate MFD03726.bin.c.1 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
10582059 10582059 PRJNA312615_P_NODE_27909_length_231_cov_2.197802_g27758_i0 PRJNA312615 27909 231 2.197802 5.07692262 Mesoterricola sediminis 2927980 Bacteria Bacteria 56.5 0.002   NTclustered gi|2490895851|dbj|AP027081.1| 2927980 g27758 i0 96.97 0.264069264069264 33 1 14 0 151 183 2604290 2604258 Mesoterricola sediminis W786 DNA, complete genome blastn 61 56.5 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Mesoterricola Mesoterricola sediminis
26662433 26662433 PRJNA312615_P_NODE_12441_length_350_cov_3.651163_g12291_i0 PRJNA312615 12441 350 3.651163 12.7790705 Acidobacteriota bacterium 1978231 Bacteria Bacteria 48.5 0.00112   NR MBX3265733.1 1978231 g12291 i0 32.5 0.711428571428571 83 51 68.6 3 348 109 152 232 MBX3265733.1 hypothetical protein [Acidobacteriota bacterium] diamond 249 48.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27453709 27453709 PRJNA312615_P_NODE_18843_length_281_cov_1.297414_g18692_i0 PRJNA312615 18843 281 1.297414 3.64573334 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 69.7 9.19e-12   NR HYW72085.1 2283092 g18692 i0 38.2 0.811387900355872 76 47 81.1 0 280 53 153 228 HYW72085.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 228 69.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27502813 27502813 PRJNA312615_P_NODE_6923_length_464_cov_3.527711_g6773_i0 PRJNA312615 6923 464 3.527711 16.36857904 Pseudomonadati 3379134 Bacteria Bacteria 185 2.7499999999999992e-55   NR MEW5980043.1 1978231 g6773 i0 59.2 13.7586206896552 152 58 98.3 1 9 464 6 153 MEW5980043.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] diamond 6384 186 0.99462365591397806 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28084889 28084889 PRJNA312615_P_NODE_43025_length_186_cov_1.956204_g42874_i0 PRJNA312615 43025 186 1.956204 3.63853944 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.00846   NR MEP6593608.1 1978231 g42874 i0 45.5 1.41935483870968 44 22 67.7 1 15 140 90 133 MEP6593608.1 hypothetical protein [Acidobacteriota bacterium] diamond 264 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28274294 28274294 PRJNA312615_P_NODE_12106_length_355_cov_3.366013_g11956_i0 PRJNA312615 12106 355 3.366013 11.94934615 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 140 2.73e-38   NR HEY4362301.1 2212468 g11956 i0 59.3 8.65352112676056 113 46 95.5 0 1 339 161 273 HEY4362301.1 aldolase/citrate lyase family protein [Bryobacteraceae bacterium] diamond 3072 140 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28653355 28653355 PRJNA312615_P_NODE_49327_length_170_cov_1.669421_g49176_i0 PRJNA312615 49327 170 1.669421 2.8380157 Acidobacteriota bacterium 1978231 Bacteria Bacteria 70.1 2.66e-12   NR MBI2688000.1 1978231 g49176 i0 70 1.05882352941176 60 14 98.8 1 169 2 37 96 MBI2688000.1 glycosyltransferase [Acidobacteriota bacterium] diamond 180 70.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28842601 28842601 PRJNA312615_P_NODE_22008_length_260_cov_1.445498_g21857_i0 PRJNA312615 22008 260 1.445498 3.7582948 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 82 5.91e-16   NR NNE99019.1 2283092 g21857 i0 42.9 2.86153846153846 84 47 96.9 1 253 2 158 240 NNE99019.1 M24 family metallopeptidase [Pyrinomonadaceae bacterium] diamond 744 82 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29853196 29853196 PRJNA312615_P_NODE_331_length_1445_cov_4.729943_g285_i0 PRJNA312615 331 1445 4.729943 68.34767635 Acidobacteriota bacterium 1978231 Bacteria Bacteria 60.1 9.09e-6   NR MBS1873370.1 1978231 g285 i0 34.4 0.259515570934256 125 60 25.3 5 1010 1375 112 217 MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] diamond 375 60.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30154755 30154755 PRJNA312615_P_NODE_46072_length_179_cov_1.176923_g45921_i0 PRJNA312615 46072 179 1.176923 2.10669217 Pseudomonadati 3379134 Bacteria Bacteria 116 1.38e-30   NR HXJ39221.1 2212468 g45921 i0 93.2 3.95530726256983 59 4 98.9 0 1 177 157 215 HXJ39221.1 ROK family transcriptional regulator [Bryobacteraceae bacterium] diamond 708 116 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30327539 30327539 PRJNA312615_P_NODE_33992_length_210_cov_1.559006_g33841_i0 PRJNA312615 33992 210 1.559006 3.2739126 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 51.6 1.75e-5   NR MDR3737288.1 2052142 g33841 i0 38.3 0.857142857142857 60 37 85.7 0 182 3 200 259 MDR3737288.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 180 51.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30408094 30408094 PRJNA312615_P_NODE_39173_length_196_cov_1.238095_g39022_i0 PRJNA312615 39173 196 1.238095 2.4266662 Bacteria 2 Bacteria Bacteria 93.6 4.500000000000001e-22   NR MBI4469680.1 1978231 g39022 i0 65.6 10.7602040816327 64 21 98 1 5 196 13 75 MBI4469680.1 peptide-methionine (S)-S-oxide reductase MsrA [Acidobacteriota bacterium] diamond 2109 93.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32129264 32129264 PRJNA312615_P_NODE_55498_length_164_cov_0.886957_g55347_i0 PRJNA312615 55498 164 0.886957 1.45460948 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 49.3 6.23e-5   NR MEO7539570.1 2283092 g55347 i0 59.3 0.98780487804878 54 16 98.8 1 3 164 374 421 MEO7539570.1 ATP-binding protein [Pyrinomonadaceae bacterium] diamond 162 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;