RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA312615" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA312615 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24604709 24604709 PRJNA312615_P_NODE_56300_length_163_cov_0.912281_g56149_i0 PRJNA312615 56300 163 0.912281 1.48701803 Pyrobaculum aerophilum 13773 Archaea Archaea 274 2.66e-69   NTclustered gi|18308975|gb|AE009441.1| 178306 g56149 i0 96.933 1 163 5 100 0 1 163 1902915 1903077 Pyrobaculum aerophilum str. IM2, complete genome blastn 163 274 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
28685055 28685055 PRJNA312615_P_NODE_27207_length_234_cov_2.205405_g27056_i0 PRJNA312615 27207 234 2.205405 5.1606477 Nitrosarchaeum sp. 2026886 Archaea Archaea 107 4.17e-25   NR MFB5612793.1 2026886 g27056 i0 68.8 0.987179487179487 77 24 98.7 0 1 231 510 586 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 231 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
30011219 30011219 PRJNA312615_P_NODE_15971_length_307_cov_2.302326_g15820_i0 PRJNA312615 15971 307 2.302326 7.06814082 Nitrososphaerota archaeon 2026795 Archaea Archaea 64.7 8.67e-10   NR MDA4123330.1 2026795 g15820 i0 33.3 1.96416938110749 102 67 99.7 1 306 1 18 118 MDA4123330.1 aspartate/glutamate racemase family protein [Nitrososphaerota archaeon] diamond 603 64.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32855298 32855298 PRJNA312615_P_NODE_4400_length_567_cov_3.001931_g4255_i1 PRJNA312615 4400 567 3.001931 17.02094877 uncultured marine thaumarchaeote KM3_53_F 1167203 Archaea Archaea 89 2.04e-19   NR AIF11849.1 1456186 g4255 i1 75.9 0.285714285714286 54 13 28.6 0 220 59 40 93 AIF11849.1 hypothetical protein [uncultured marine thaumarchaeote KM3_53_F08] diamond 162 89 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_53_F08

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;