RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312615", tax_kingdom = "Methanobacteriati" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28179447 28179447 PRJNA312615_P_NODE_25306_length_243_cov_1.206186_g25155_i0 PRJNA312615 25306 243 1.206186 2.93103198 Candidatus Poseidoniia archaeon 2666348 Archaea Archaea 41.6 0.0289   NR MEO2222597.1 2666348 g25155 i0 35.6 0.555555555555556 45 29 55.6 0 136 2 44 88 MEO2222597.1 DCC1-like thiol-disulfide oxidoreductase family protein [Candidatus Poseidoniia archaeon] diamond 135 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia       Candidatus Poseidoniia archaeon
30864051 30864051 PRJNA312615_P_NODE_4134_length_583_cov_2.619850_g3992_i0 PRJNA312615 4134 583 2.61985 15.2737255 Candidatus Poseidonia alphae 1915863 Archaea Archaea 60.5 3.57e-7   NR MDA7464142.1 1915863 g3992 i0 44.1 0.97770154373928 68 32 32.9 3 3 194 201 266 MDA7464142.1 lipase family protein [Candidatus Poseidonia alphae] diamond 570 60.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;