RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA312615", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA312615 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26757615 26757615 PRJNA312615_P_NODE_30181_length_222_cov_13.647399_g30030_i0 PRJNA312615 30181 222 13.647399 30.29722578 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 44.7 0.00539   NR PJF16516.1 1246581 g30030 i0 48.1 0.702702702702703 52 22 70.3 1 221 66 202 248 PJF16516.1 hypothetical protein PSACC_03723 [Paramicrosporidium saccamoebae] diamond 156 44.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31591442 31591442 PRJNA312615_P_NODE_26676_length_236_cov_15.122995_g26525_i0 PRJNA312615 26676 236 15.122995 35.6902682 Rozella allomycis CSF55 988480 Fungi Fungi 82 9.32e-17   NR EPZ34692.1 988480 g26525 i0 66.2 3.99152542372881 65 21 81.4 1 214 23 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32382233 32382233 PRJNA312615_P_NODE_19999_length_272_cov_2.901345_g19848_i0 PRJNA312615 19999 272 2.901345 7.8916584 Rozella allomycis CSF55 988480 Fungi Fungi 97.1 2.4099999999999994e-23   NR EPZ34940.1 988480 g19848 i0 70.5 0.672794117647059 61 18 67.3 0 90 272 10 70 EPZ34940.1 40S ribosomal protein S19-A [Rozella allomycis CSF55] diamond 183 97.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;