contig_metadata
11 rows where bioproject = "PRJNA312615", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2339384 | 2339384 | PRJNA312615_P_NODE_53302_length_166_cov_0.863248_g53151_i0 | PRJNA312615 | 53302 | 166 | 0.863248 | 1.43299168 | Bacteria | 2 | Bacteria | Bacteria | 84.2 | 4.93e-12 | NTclustered | gi|2108129769|gb|CP070729.1| | 2026734 | g53151 | i0 | 90.625 | 3.80120481927711 | 64 | 4 | 38 | 2 | 20 | 82 | 944341 | 944279 | MAG: Dehalococcoidia bacterium isolate bin423 chromosome | blastn | 631 | 84.2 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 16366343 | 16366343 | PRJNA312615_P_NODE_30133_length_223_cov_1.149425_g29982_i0 | PRJNA312615 | 30133 | 223 | 1.149425 | 2.56321775 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 92.4 | 7.49e-20 | NR | MCH2658239.1 | 2026734 | g29982 | i0 | 55.4 | 3.88789237668161 | 74 | 32 | 98.2 | 1 | 3 | 221 | 111 | 184 | MCH2658239.1 DEAD/DEAH box helicase [Dehalococcoidia bacterium] | diamond | 867 | 92.4 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 22740450 | 22740450 | PRJNA312615_P_NODE_1158_length_940_cov_1.722783_g1055_i0 | PRJNA312615 | 1158 | 940 | 1.722783 | 16.1941602 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 106 | 3.8600000000000003e-22 | NR | MCU0466058.1 | 2052143 | g1055 | i0 | 32.2 | 1.53510638297872 | 236 | 145 | 74.4 | 5 | 712 | 14 | 2 | 225 | MCU0466058.1 DUF917 domain-containing protein [Anaerolineae bacterium] | diamond | 1443 | 106 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 27516636 | 27516636 | PRJNA312615_P_NODE_20703_length_268_cov_0.931507_g20552_i0 | PRJNA312615 | 20703 | 268 | 0.931507 | 2.49643876 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 42 | 0.045 | NR | MDO9333650.1 | 2026733 | g20552 | i0 | 36.5 | 0.828358208955224 | 74 | 42 | 81.7 | 3 | 240 | 22 | 74 | 143 | MDO9333650.1 hypothetical protein [Dehalococcoidales bacterium] | diamond | 222 | 42 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium | ||||
| 28148245 | 28148245 | PRJNA312615_P_NODE_27485_length_233_cov_1.402174_g27334_i0 | PRJNA312615 | 27485 | 233 | 1.402174 | 3.26706542 | Caldilineae bacterium | 2420332 | Bacteria | Bacteria | 45.1 | 0.00494 | NR | RME54287.1 | 2420332 | g27334 | i0 | 47.5 | 0.759656652360515 | 59 | 22 | 64.4 | 2 | 42 | 191 | 63 | 121 | RME54287.1 MAG: glycogen debranching protein, partial [Caldilineae bacterium] | diamond | 177 | 45.1 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineae bacterium | |||||
| 29127176 | 29127176 | PRJNA312615_P_NODE_14749_length_320_cov_1.129151_g14598_i0 | PRJNA312615 | 14749 | 320 | 1.129151 | 3.6132832 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 55.5 | 3.08e-6 | NR | MDO9332954.1 | 2026733 | g14598 | i0 | 32.1 | 0.99375 | 106 | 65 | 93.8 | 3 | 17 | 316 | 359 | 463 | MDO9332954.1 hypothetical protein [Dehalococcoidales bacterium] | diamond | 318 | 55.5 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium | ||||
| 29221816 | 29221816 | PRJNA312615_P_NODE_28829_length_228_cov_1.139665_g28678_i0 | PRJNA312615 | 28829 | 228 | 1.139665 | 2.5984362 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 147 | 9.38e-41 | NR | MDO9333446.1 | 2026733 | g28678 | i0 | 90.7 | 0.986842105263158 | 75 | 7 | 98.7 | 0 | 3 | 227 | 80 | 154 | MDO9333446.1 biotin/lipoyl-containing protein [Dehalococcoidales bacterium] | diamond | 225 | 147 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium | ||||
| 29459894 | 29459894 | PRJNA312615_P_NODE_14410_length_323_cov_4.262774_g14259_i0 | PRJNA312615 | 14410 | 323 | 4.262774 | 13.76876002 | root | 1 | Root_unresolved | Root_unresolved | 46.2 | 0.00597 | NR | MFA5379264.1 | 2026734 | g14259 | i0 | 30.5 | 4.09597523219814 | 105 | 48 | 85.4 | 3 | 301 | 26 | 1728 | 1820 | MFA5379264.1 PKD domain-containing protein [Dehalococcoidia bacterium] | diamond | 1323 | 46.2 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 29694914 | 29694914 | PRJNA312615_P_NODE_9810_length_395_cov_2.930636_g9660_i0 | PRJNA312615 | 9810 | 395 | 2.930636 | 11.5760122 | Chloroflexi bacterium CFX4 | 2293709 | Bacteria | Bacteria | 52 | 1.8e-5 | NR | MCE7946516.1 | 2293709 | g9660 | i0 | 48.3 | 0.440506329113924 | 58 | 27 | 44.1 | 1 | 391 | 218 | 65 | 119 | MCE7946516.1 hypothetical protein [Chloroflexi bacterium CFX4] | diamond | 174 | 52 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexi bacterium CFX4 | ||||||
| 31514223 | 31514223 | PRJNA312615_P_NODE_37776_length_200_cov_1.013245_g37625_i0 | PRJNA312615 | 37776 | 200 | 1.013245 | 2.02649 | Aggregatilinea | 2806306 | Bacteria | Bacteria | 63.9 | 7.11e-10 | NR | WP_119065806.1 | 913108 | g37625 | i0 | 56.5 | 2.475 | 62 | 27 | 93 | 0 | 1 | 186 | 483 | 544 | WP_119065806.1 insulinase family protein [Aggregatilinea lenta] | diamond | 495 | 63.9 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Aggregatilineales | Aggregatilineaceae | Aggregatilinea | Aggregatilinea lenta | ||
| 32494874 | 32494874 | PRJNA312615_P_NODE_41239_length_191_cov_0.957746_g41088_i0 | PRJNA312615 | 41239 | 191 | 0.957746 | 1.82929486 | root | 1 | Root_unresolved | Root_unresolved | 55.8 | 4.35e-7 | NR | MYE27109.1 | 2026724 | g41088 | i0 | 69.7 | 10.9633507853403 | 33 | 10 | 51.8 | 0 | 73 | 171 | 3 | 35 | MYE27109.1 DnaJ domain-containing protein [Chloroflexota bacterium] | diamond | 2094 | 55.8 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;