RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA312615", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 28 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 28 ✖

bioproject 1

  • PRJNA312615 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4206045 4206045 PRJNA312615_P_NODE_8744_length_417_cov_2.869565_g8594_i0 PRJNA312615 8744 417 2.869565 11.96608605 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 130 2.29e-36   NR XP_045157389.2 6596 g8594 i0 68.1 7.1726618705036 91 29 65.5 0 407 135 1 91 XP_045157389.2 LOW QUALITY PROTEIN: 60S ribosomal protein L37-like [Mercenaria mercenaria] diamond 2991 130 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
9306645 9306645 PRJNA312615_P_NODE_53348_length_165_cov_2.637931_g53197_i0 PRJNA312615 53348 165 2.637931 4.35258615 Aplysia californica 6500 Mollusca Mollusca 91.6 2.92e-14   NTclustered gi|1897934918|ref|XM_035971617.1| 6500 g53197 i0 91.045 28.5454545454545 67 6 41 0 99 165 1362 1428 PREDICTED: Aplysia californica dynein heavy chain 7, axonemal-like (LOC101846299), mRNA blastn 4710 91.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
11856481 11856481 PRJNA312615_P_NODE_16050_length_306_cov_4.365759_g15899_i0 PRJNA312615 16050 306 4.365759 13.35922254 Littorina saxatilis 31220 Mollusca Mollusca 60.2 1.71e-4   NTclustered gi|2868609750|ref|XM_070343994.1| 31220 g15899 i0 97.143 0.209150326797386 35 1 11 0 272 306 1421 1387 PREDICTED: Littorina saxatilis tubulin beta-4B chain-like (LOC138971279), mRNA blastn 64 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
14407341 14407341 PRJNA312615_P_NODE_43272_length_186_cov_1.116788_g43121_i0 PRJNA312615 43272 186 1.116788 2.07722568 Littorina saxatilis 31220 Mollusca Mollusca 215 1.92e-51   NTclustered gi|2868661765|ref|XM_070355016.1| 31220 g43121 i0 90.683 89.247311827957 161 15 87 0 10 170 777 617 PREDICTED: Littorina saxatilis ATP synthase subunit beta, mitochondrial-like (LOC138981875), mRNA blastn 16600 215 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
26884578 26884578 PRJNA312615_P_NODE_15021_length_317_cov_1.570896_g14870_i0 PRJNA312615 15021 317 1.570896 4.97974032 Elysia chlorotica 188477 Mollusca Mollusca 51.6 1.42e-5   NR RUS74546.1 188477 g14870 i0 45.6 0.643533123028391 68 34 64.4 1 77 280 52 116 RUS74546.1 hypothetical protein EGW08_017694, partial [Elysia chlorotica] diamond 204 51.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
27800931 27800931 PRJNA312615_P_NODE_27544_length_233_cov_1.108696_g27393_i0 PRJNA312615 27544 233 1.108696 2.58326168 Gigantopelta aegis 1735272 Mollusca Mollusca 48.5 3.04e-4   NR XP_041375551.1 1735272 g27393 i0 41.3 2.48497854077253 63 37 81.1 0 195 7 2 64 XP_041375551.1 importin-4-like [Gigantopelta aegis] diamond 579 48.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
28228564 28228564 PRJNA312615_P_NODE_21346_length_264_cov_1.106977_g21195_i0 PRJNA312615 21346 264 1.106977 2.92241928 Opisthokonta 33154 Mollusca Mollusca 120 6.579999999999999e-31   NR CAG5136775.1 100452 g21195 i0 65.5 1.97727272727273 87 30 98.9 0 1 261 198 284 CAG5136775.1 unnamed protein product, partial [Candidula unifasciata] diamond 522 121 0.991735537190083 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
28323401 28323401 PRJNA312615_P_NODE_27126_length_235_cov_1.091398_g26975_i0 PRJNA312615 27126 235 1.091398 2.5647853 Ostreidae 6563 Mollusca Mollusca 66.2 6.62e-11   NR XP_022313052.1 6565 g26975 i0 39.7 2.79574468085106 73 42 90.6 1 218 6 8 80 XP_022313052.1 exosome complex component RRP40-like [Crassostrea virginica] diamond 657 66.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
28369060 28369060 PRJNA312615_P_NODE_33986_length_210_cov_1.583851_g33835_i0 PRJNA312615 33986 210 1.583851 3.3260871 Batillaria attramentaria 370345 Mollusca Mollusca 71.2 2.1e-12   NR KAK7484063.1 370345 g33835 i0 52.4 0.9 63 30 90 0 20 208 140 202 KAK7484063.1 hypothetical protein BaRGS_00024675 [Batillaria attramentaria] diamond 189 71.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria
28607719 28607719 PRJNA312615_P_NODE_37067_length_202_cov_0.928105_g36916_i0 PRJNA312615 37067 202 0.928105 1.8747721 root 1 Root_unresolved Root_unresolved 50.1 1.31e-5   NR XP_041378880.1 1735272 g36916 i0 48.3 6.37128712871287 58 30 86.1 0 181 8 30 87 XP_041378880.1 programmed cell death protein 5-like [Gigantopelta aegis] diamond 1287 50.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
28810806 28810806 PRJNA312615_P_NODE_53688_length_165_cov_0.965517_g53537_i0 PRJNA312615 53688 165 0.965517 1.59310305 Pecten maximus 6579 Mollusca Mollusca 54.3 1.06e-6   NR XP_033745667.1 6579 g53537 i0 56.1 1.49090909090909 41 18 74.5 0 41 163 282 322 XP_033745667.1 uncharacterized protein LOC117331179 [Pecten maximus] diamond 246 54.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
28874238 28874238 PRJNA312615_P_NODE_13828_length_331_cov_1.343972_g13677_i0 PRJNA312615 13828 331 1.343972 4.44854732 Octopus sinensis 2607531 Mollusca Mollusca 57.8 5.31e-7   NR XP_029640763.1 2607531 g13677 i0 37.8 0.81570996978852 90 50 81.6 2 314 45 289 372 XP_029640763.1 polyadenylate-binding protein 4-like [Octopus sinensis] diamond 270 57.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
29207786 29207786 PRJNA312615_P_NODE_23029_length_254_cov_1.492683_g22878_i0 PRJNA312615 23029 254 1.492683 3.79141482 Metazoa 33208 Mollusca Mollusca 121 4.27e-31   NR XP_064617664.1 13599 g22878 i0 65.1 10.7834645669291 83 29 98 0 6 254 115 197 XP_064617664.1 glutathionyl-hydroquinone reductase YqjG-like isoform X2 [Liolophura japonica] diamond 2739 121 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
29617724 29617724 PRJNA312615_P_NODE_10950_length_374_cov_0.932308_g10800_i0 PRJNA312615 10950 374 0.932308 3.48683192 Bivalvia 6544 Mollusca Mollusca 97.1 1.71e-20   NR XP_052105175.1 6549 g10800 i0 37.6 16.8128342245989 117 73 93.9 0 351 1 1328 1444 XP_052105175.1 cytoplasmic dynein 1 heavy chain 1-like isoform X1 [Mytilus californianus] diamond 6288 97.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
29789808 29789808 PRJNA312615_P_NODE_30791_length_220_cov_2.257310_g30640_i0 PRJNA312615 30791 220 2.25731 4.966082 Dreissena polymorpha 45954 Mollusca Mollusca 47 3.74e-4   NR KAH3711329.1 45954 g30640 i0 38.6 3.36818181818182 57 35 77.7 0 220 50 91 147 KAH3711329.1 hypothetical protein DPMN_070834 [Dreissena polymorpha] diamond 741 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
30565415 30565415 PRJNA312615_P_NODE_43013_length_186_cov_2.218978_g42862_i0 PRJNA312615 43013 186 2.218978 4.12729908 Opisthokonta 33154 Mollusca Mollusca 74.3 7.25e-14   NR XP_014774067.2 37653 g42862 i0 60.4 14.0161290322581 48 19 77.4 0 43 186 5 52 XP_014774067.2 replication factor C subunit 5 [Octopus bimaculoides] diamond 2607 74.7 0.994645247657296 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
30927522 30927522 PRJNA312615_P_NODE_13634_length_333_cov_3.010563_g13483_i0 PRJNA312615 13634 333 3.010563 10.02517479 Magallana gigas 29159 Mollusca Mollusca 68.6 6.78e-11   NR XP_034318848.2 29159 g13483 i0 43.8 8.84684684684685 73 40 64.9 1 103 318 74 146 XP_034318848.2 procathepsin L [Magallana gigas] diamond 2946 68.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
31148084 31148084 PRJNA312615_P_NODE_20255_length_271_cov_0.702703_g20104_i0 PRJNA312615 20255 271 0.702703 1.90432513 Elysia crispata 231223 Mollusca Mollusca 42.4 0.0353   NR KAK3764005.1 231223 g20104 i0 30.4 0.874538745387454 79 44 75.3 2 10 213 22 100 KAK3764005.1 hypothetical protein RRG08_004369 [Elysia crispata] diamond 237 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
31464953 31464953 PRJNA312615_P_NODE_25836_length_241_cov_0.791667_g25685_i0 PRJNA312615 25836 241 0.791667 1.90791747 Aplysia californica 6500 Mollusca Mollusca 60.1 2.87e-8   NR XP_005095836.1 6500 g25685 i0 32.9 1.96680497925311 79 47 98.3 1 241 5 154 226 XP_005095836.1 26S proteasome non-ATPase regulatory subunit 1 [Aplysia californica] diamond 474 60.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
31464955 31464955 PRJNA312615_P_NODE_32436_length_215_cov_1.198795_g32285_i0 PRJNA312615 32436 215 1.198795 2.57740925 Batillaria attramentaria 370345 Mollusca Mollusca 89.7 7.03e-19   NR KAK7498760.1 370345 g32285 i0 60.9 0.962790697674419 69 26 94.9 1 3 206 298 366 KAK7498760.1 hypothetical protein BaRGS_00009852, partial [Batillaria attramentaria] diamond 207 89.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria
31654327 31654327 PRJNA312615_P_NODE_14717_length_320_cov_1.797048_g14566_i0 PRJNA312615 14717 320 1.797048 5.7505536 Acanthosepion pharaonis 158019 Mollusca Mollusca 147 1.7399999999999999e-38   NR CAE1240546.1 158019 g14566 i0 69.6 6.834375 102 31 95.6 0 1 306 901 1002 CAE1240546.1 CCT3 [Acanthosepion pharaonis] diamond 2187 147 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
31988358 31988358 PRJNA312615_P_NODE_24918_length_245_cov_1.040816_g24767_i0 PRJNA312615 24918 245 1.040816 2.5499992 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 9.6e-33   NR XP_005099417.1 6500 g24767 i0 72 24.1102040816327 75 21 91.8 0 225 1 29 103 XP_005099417.1 ubiquitin-conjugating enzyme E2-17 kDa isoform X1 [Aplysia californica] diamond 5907 121 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
32115122 32115122 PRJNA312615_P_NODE_27218_length_234_cov_1.929730_g27067_i0 PRJNA312615 27218 234 1.92973 4.5155682 Unionidae 47526 Mollusca Mollusca 96.7 1.67e-21   NR KAL3885451.1 1069815 g27067 i0 68.2 2.52564102564103 66 21 84.6 0 199 2 10 75 KAL3885451.1 hypothetical protein ACJMK2_025508, partial [Sinanodonta woodiana] diamond 591 96.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Sinanodonta Sinanodonta woodiana
32224075 32224075 PRJNA312615_P_NODE_18418_length_284_cov_1.842553_g18267_i0 PRJNA312615 18418 284 1.842553 5.23285052 Ruditapes philippinarum 129788 Mollusca Mollusca 60.5 3.38e-8   NR XP_060588978.1 129788 g18267 i0 48.3 2.65140845070423 60 31 63.4 0 185 6 22 81 XP_060588978.1 proprotein convertase subtilisin/kexin type 5-like [Ruditapes philippinarum] diamond 753 60.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
32319226 32319226 PRJNA312615_P_NODE_17039_length_297_cov_1.233871_g16888_i0 PRJNA312615 17039 297 1.233871 3.66459687 Pinctada imbricata 66713 Mollusca Mollusca 80.5 3.57e-15   NR KAK3086654.1 66713 g16888 i0 41.9 3.75757575757576 93 54 93.9 0 19 297 242 334 KAK3086654.1 hypothetical protein FSP39_021442 [Pinctada imbricata] diamond 1116 80.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
32368367 32368367 PRJNA312615_P_NODE_51739_length_167_cov_0.864407_g51588_i0 PRJNA312615 51739 167 0.864407 1.44355969 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.9 7.64e-12   NR KAH9502515.1 55810 g51588 i0 62.3 1.90419161676647 53 20 95.2 0 160 2 693 745 KAH9502515.1 hypothetical protein Btru_068881 [Bulinus truncatus] diamond 318 68.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
32399914 32399914 PRJNA312615_P_NODE_56939_length_163_cov_0.894737_g56788_i0 PRJNA312615 56939 163 0.894737 1.45842131 Mytilus 6548 Mollusca Mollusca 64.7 1.9e-10   NR VDI41404.1 29158 g56788 i0 54.9 2.83435582822086 51 23 93.9 0 163 11 182 232 VDI41404.1 calcium/calmodulin-dependent protein kinase IV [Mytilus galloprovincialis] diamond 462 64.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus galloprovincialis
32666409 32666409 PRJNA312615_P_NODE_36560_length_203_cov_1.383117_g36409_i0 PRJNA312615 36560 203 1.383117 2.80772751 Littorina saxatilis 31220 Mollusca Mollusca 53.1 4.63e-6   NR XP_070174997.1 31220 g36409 i0 41.8 0.990147783251232 67 39 99 0 3 203 420 486 XP_070174997.1 serine hydroxymethyltransferase, mitochondrial-like [Littorina saxatilis] diamond 201 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;