RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312615", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22054564 22054564 PRJNA312615_P_NODE_23858_length_250_cov_1.268657_g23707_i0 PRJNA312615 23858 250 1.268657 3.1716425 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 110 4.2e-26   NR MCX6136456.1 2049428 g23707 i0 59 2.916 83 34 99.6 0 249 1 156 238 MCX6136456.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Ignavibacteriales bacterium] diamond 729 110 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32683832 32683832 PRJNA312615_P_NODE_26080_length_239_cov_2.147368_g25929_i0 PRJNA312615 26080 239 2.147368 5.13220952 Bacteria 2 Bacteria Bacteria 44.3 0.00184   NR MBI2420268.1 2049428 g25929 i0 63.6 0.891213389121339 33 12 41.4 0 141 239 3 35 MBI2420268.1 RNA-binding protein [Ignavibacteriales bacterium] diamond 213 44.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;