RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312615", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27548172 27548172 PRJNA312615_P_NODE_42444_length_188_cov_1.100719_g42293_i0 PRJNA312615 42444 188 1.100719 2.06935172 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 55.8 2.72e-8   NR MCD6081268.1 2052148 g42293 i0 48.4 1.97872340425532 62 31 97.3 1 188 6 14 75 MCD6081268.1 RNA-binding protein [candidate division WOR-3 bacterium] diamond 372 55.8 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29997194 29997194 PRJNA312615_P_NODE_21891_length_261_cov_0.929245_g21740_i0 PRJNA312615 21891 261 0.929245 2.42532945 Bacteria 2 Bacteria Bacteria 49.3 1.1e-5   NR MEO0242362.1 2052148 g21740 i0 52.8 4.54022988505747 36 17 41.4 0 257 150 18 53 MEO0242362.1 elongation factor Tu [candidate division WOR-3 bacterium] diamond 1185 49.7 0.991951710261569 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;